RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 FRMD1Q8N878 549 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SGF29Q96ES7 293 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 ATXN7L3BQ96GX2 97 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 PDLIM5Q96HC4 596 aaKnown RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 ATP6V1G3Q96LB4 118 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 ORAI3Q9BRQ5 295 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TIMM29Q9BSF4 260 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 BOCQ9BWV1 1114 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 IQCGQ9H095 443 aaKnown RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 MIR1-1HGQ9H1L0 117 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 ERVMER34-1Q9H9K5 563 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 GPAMQ9HCL2 828 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 FZD3Q9NPG1 666 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SNX15Q9NRS6 342 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 GPR27Q9NS67 375 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 WDR70Q9NW82 654 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 TRNAU1APQ9NX07 287 aaKnown RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 SLC17A6Q9P2U8 582 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 KLQ9UEF7 1012 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 RAB23Q9ULC3 237 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 INVSQ9Y283 1065 aa10.88□□□□□ -0.67
HDLBP-242ENST00000488013 MTO1Q9Y2Z2 717 aaKnown RBP10.88□□□□□ -0.67
HDLBP-242ENST00000488013 A0A096LPK6 155 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 HMX2A2RU54 273 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 TPP1O14773 563 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 GPR39O43194 453 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 HRO43593 1189 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 DFNA5O60443 496 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 MTX2O75431 263 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 TNFP01375 233 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ALDOAP04075 364 aaKnown RBP10.87□□□□□ -0.67
HDLBP-242ENST00000488013 CEACAM5P06731 702 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 HOXB1P14653 301 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ZNF8P17098 575 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-242ENST00000488013 KRT4P19013 534 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 SAT1P21673 171 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 DHPSP49366 369 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-242ENST00000488013 CLCNKAP51800 687 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 SLC18A1P54219 525 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 CLDN2P57739 230 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 SRP54P61011 504 aaKnown RBP10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ATP6V0D1P61421 351 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 PPARDQ03181 441 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 DMPKQ09013 629 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 SYTL3Q4VX76 610 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ZNF549Q6P9A3 640 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 IL27RAQ6UWB1 636 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ENPP7Q6UWV6 458 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 NEK10Q6ZWH5 1172 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 PELI3Q8N2H9 469 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ZBTB2Q8N680 514 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 OR2L2Q8NH16 312 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 C1orf216Q8TAB5 229 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 HM13Q8TCT9 377 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 MZB1Q8WU39 189 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 TMEM159Q96B96 161 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 SLC6A18Q96N87 628 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 NDNQ99608 321 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 MYOCQ99972 504 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 LGR4Q9BXB1 951 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ZDHHC5Q9C0B5 715 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 KCNH6Q9H252 994 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 DPEP2Q9H4A9 486 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 EBF2Q9HAK2 575 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 TM9SF3Q9HD45 589 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 MKS1Q9NXB0 559 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ZNHIT2Q9UHR6 403 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 ACSL5Q9ULC5 683 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 TMEM98Q9Y2Y6 226 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 PCDHGA5Q9Y5G8 931 aa10.87□□□□□ -0.67
HDLBP-242ENST00000488013 A0A1W2PR77 199 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 PRSS38A1L453 326 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 OR2AG2A6NM03 316 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 H3BM21 787 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 COPEO14579 308 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 YKT6O15498 198 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 DNAJC6O75061 913 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 GLRA3O75311 464 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 NIPSNAP2O75323 286 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 RFPL1O75677 317 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 POP7O75817 140 aaKnown RBP10.86□□□□□ -0.67
HDLBP-242ENST00000488013 SLCO2B1O94956 709 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 C2P06681 752 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 ZNF37AP17032 561 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-242ENST00000488013 AOAHP28039 575 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 CRHR1P34998 444 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 CLCN7P51798 805 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 ARHGAP8P85298 464 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 SLC18A2Q05940 514 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 ILF3Q12906 894 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDLBP-242ENST00000488013 BMPR2Q13873 1038 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 SEPT7Q16181 437 aaKnown RBP10.86□□□□□ -0.67
HDLBP-242ENST00000488013 KHDC1Q4VXA5 237 aaKnown RBP10.86□□□□□ -0.67
HDLBP-242ENST00000488013 PYCR3Q53H96 274 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 PEAR1Q5VY43 1037 aaPredicted RBP10.86□□□□□ -0.67
HDLBP-242ENST00000488013 DOK6Q6PKX4 331 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 DET1Q7L5Y6 550 aa10.86□□□□□ -0.67
HDLBP-242ENST00000488013 SRRM1Q8IYB3 904 aaKnown RBP10.86□□□□□ -0.67
HDLBP-242ENST00000488013 ARFGAP2Q8N6H7 521 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms