RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 CCR7P32248 378 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 CBSP35520 551 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 TAS2R38P59533 333 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 PON2Q15165 354 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 TGFBIQ15582 683 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 PFKFB4Q16877 469 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 TTLL9Q3SXZ7 439 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 KIAA1211LQ6NV74 962 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 CYHR1Q6ZMK1 362 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 NLRP8Q86W28 1048 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 FBXO39Q8N4B4 442 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 IL17RCQ8NAC3 791 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 AGR3Q8TD06 166 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 FAM131CQ96AQ9 280 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 FAM161BQ96MY7 647 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 NMUR2Q9GZQ4 415 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 C8orf33Q9H7E9 229 aaPredicted RBP9.3□□□□□ -0.92
SF3B1-211ENST00000487698 COG4Q9H9E3 785 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 EML4Q9HC35 981 aaKnown RBP9.3□□□□□ -0.92
SF3B1-211ENST00000487698 CD248Q9HCU0 757 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 TNFRSF12AQ9NP84 129 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 HEBP1Q9NRV9 189 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 NUDT4Q9NZJ9 180 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 CNOT6Q9ULM6 557 aaKnown RBP9.3□□□□□ -0.92
SF3B1-211ENST00000487698 NUMA1Q14980 2115 aa9.3□□□□□ -0.92
SF3B1-211ENST00000487698 LRRC14BA6NHZ5 514 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SLCO1B7G3V0H7 640 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 NEMP1O14524 444 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 FCHO1O14526 889 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ADAM23O75077 832 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SUPT7LO94864 414 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 C7P10643 843 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ENO3P13929 434 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ALDH18A1P54886 795 aaKnown RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 NCALDP61601 193 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 RPS14P62263 151 aaKnown RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ACTN3Q08043 901 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 VWA5B1Q5TIE3 1220 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SEL1L3Q68CR1 1132 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ZNF776Q68DI1 518 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 DET1Q7L5Y6 550 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 RAB44Q7Z6P3 723 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 CUZD1Q86UP6 607 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 GPSM1Q86YR5 675 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 PHYKPLQ8IUZ5 450 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 MYO1HQ8N1T3 1032 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 OR2T3Q8NH03 318 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 DCUN1D1Q96GG9 259 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SHCBP1LQ9BZQ2 653 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 FBRSQ9HAH7 460 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 VTI1BQ9UEU0 232 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SERGEFQ9UGK8 458 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 LIMD1Q9UGP4 676 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ADAMTS6Q9UKP5 1117 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 A0A1W2PQF6 199 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SHISA7A6NL88 538 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 TMEM233B4DJY2 109 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 K7ESM1 405 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 QSOX1O00391 747 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 TSPAN6O43657 245 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 NUAK1O60285 661 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SYNCRIPO60506 623 aaKnown RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 RNASEH1O60930 286 aaKnown RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 FSBPO95073 299 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 UNC5CO95185 931 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 JUNP05412 331 aaKnown RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SERPINA6P08185 405 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 T-ENOLP0DO92 83 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 MSH3P20585 1137 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 DRD1P21728 446 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 EEF1DP29692 281 aaKnown RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 NAA20P61599 178 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ZBTB16Q05516 673 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SLC9B1Q4ZJI4 515 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SH2D4BQ5SQS7 431 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ZNF648Q5T619 568 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 IER5LQ5T953 404 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 PLCD3Q8N3E9 789 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 RASGEF1AQ8N9B8 481 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 PDPRQ8NCN5 879 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 CXorf40AQ8TE69 158 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ZNF483Q8TF39 744 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 NSUN5Q96P11 429 aaKnown RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 ASB2Q96Q27 587 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 PHF7Q9BWX1 381 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 FAM126AQ9BYI3 521 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 MKRN2Q9H000 416 aaKnown RBP9.29□□□□□ -0.92
SF3B1-211ENST00000487698 SAR1AQ9NR31 198 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 PCTPQ9UKL6 214 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 CDYLQ9Y232 598 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 OARD1Q9Y530 152 aa9.29□□□□□ -0.92
SF3B1-211ENST00000487698 NCF1BA6NI72 391 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 NCF1CA8MVU1 366 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 CAPN14A8MX76 684 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 KPNA5O15131 536 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 DIAPH2O60879 1101 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 FTH1P02794 183 aa9.28□□□□□ -0.92
SF3B1-211ENST00000487698 NCF1P14598 390 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-211ENST00000487698 PRLHRP49683 370 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms