RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 OASLQ15646 514 aaKnown RBP11.24□□□□□ -0.61
SPEN-205ENST00000487496 FNBP1LQ5T0N5 605 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 FAM83HQ6ZRV2 1179 aaPredicted RBP11.24□□□□□ -0.61
SPEN-205ENST00000487496 DET1Q7L5Y6 550 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 SNX20Q7Z614 316 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 ZFAND4Q86XD8 727 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 DTX1Q86Y01 620 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 BEND7Q8N7W2 519 aaPredicted RBP11.24□□□□□ -0.61
SPEN-205ENST00000487496 NAT14Q8WUY8 206 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 SNRNP27Q8WVK2 155 aaKnown RBP11.24□□□□□ -0.61
SPEN-205ENST00000487496 C1orf54Q8WWF1 131 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 PMEPA1Q969W9 287 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 ZNF514Q96K75 400 aaPredicted RBP11.24□□□□□ -0.61
SPEN-205ENST00000487496 TAAR9Q96RI9 348 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 CCNL2Q96S94 520 aaPredicted RBP11.24□□□□□ -0.61
SPEN-205ENST00000487496 FRMD8P1Q9BZ68 369 aaPredicted RBP11.24□□□□□ -0.61
SPEN-205ENST00000487496 FAM96AQ9H5X1 160 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 SLC40A1Q9NP59 571 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 LZTFL1Q9NQ48 299 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 POT1Q9NUX5 634 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 WDR70Q9NW82 654 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 OCIAD1Q9NX40 245 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 OGFRQ9NZT2 677 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 SLC30A1Q9Y6M5 507 aa11.24□□□□□ -0.61
SPEN-205ENST00000487496 MGAT4DA6NG13 374 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 EFCAB7A8K855 629 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 B4E171 279 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.23□□□□□ -0.61
SPEN-205ENST00000487496 K7ENP7 123 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 CCL22O00626 93 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 EFSO43281 561 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 SGTAO43765 313 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 UBXN7O94888 489 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 C9P02748 559 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 TYRP1P17643 537 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 AMD1P17707 334 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 ITGALP20701 1170 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 MC4RP32245 332 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 TSPAN7P41732 249 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 HALP42357 657 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 CCZ1BP86790 482 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 CCZ1P86791 482 aaPredicted RBP11.23□□□□□ -0.61
SPEN-205ENST00000487496 GPR18Q14330 331 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 POU6F1Q14863 301 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 METRNLQ641Q3 311 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 INO80CQ6PI98 192 aaPredicted RBP11.23□□□□□ -0.61
SPEN-205ENST00000487496 CCDC81Q6ZN84 652 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 FAM129CQ86XR2 697 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 PLXDC1Q8IUK5 500 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 RBM12BQ8IXT5 1001 aaKnown RBP11.23□□□□□ -0.61
SPEN-205ENST00000487496 NXPE1Q8N323 547 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 BMPERQ8N8U9 685 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 ART4Q93070 314 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 ULK4Q96C45 1275 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 CXorf40BQ96DE9 158 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 DNAJC1Q96KC8 554 aaKnown RBP11.23□□□□□ -0.61
SPEN-205ENST00000487496 LINC00615Q96LM1 132 aaPredicted RBP11.23□□□□□ -0.61
SPEN-205ENST00000487496 DDA1Q9BW61 102 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 SLC39A1Q9NY26 324 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 KLHL3Q9UH77 587 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 CRLS1Q9UJA2 301 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 PSMD13Q9UNM6 376 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 ZNF148Q9UQR1 794 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 PCDHB11Q9Y5F2 797 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 B3GALT1Q9Y5Z6 326 aa11.23□□□□□ -0.61
SPEN-205ENST00000487496 IGSF10Q6WRI0 2623 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 ERI2A8K979 691 aaKnown RBP11.22□□□□□ -0.61
SPEN-205ENST00000487496 H7C0S8 307 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 ATXN7O15265 892 aaPredicted RBP11.22□□□□□ -0.61
SPEN-205ENST00000487496 IFNB1P01574 187 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 RALBP11234 206 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 PBLDP30039 288 aaPredicted RBP11.22□□□□□ -0.61
SPEN-205ENST00000487496 CDKN1CP49918 316 aaPredicted RBP11.22□□□□□ -0.61
SPEN-205ENST00000487496 GFERP55789 205 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 MN1Q10571 1320 aaPredicted RBP11.22□□□□□ -0.61
SPEN-205ENST00000487496 SRSF6Q13247 344 aaKnown RBP11.22□□□□□ -0.61
SPEN-205ENST00000487496 SNX1Q13596 522 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 RPE65Q16518 533 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 GPR33Q49SQ1 333 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 BCL7AQ4VC05 210 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 DCAF12Q5T6F0 453 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 ANKS6Q68DC2 871 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 MICALCLQ6ZW33 695 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 PRUNE1Q86TP1 453 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 LINC00523Q86TU6 105 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 OR2L2Q8NH16 312 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 HEXDCQ8WVB3 486 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 RSC1A1Q92681 617 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 DCUN1D1Q96GG9 259 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 CDKN2AIPNLQ96HQ2 116 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 C9orf72Q96LT7 481 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 ALS2CR12Q96Q35 445 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 COPS8Q99627 209 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 ASPSCR1Q9BZE9 553 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 ETNK1Q9HBU6 452 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 NLE1Q9NVX2 485 aaPredicted RBP11.22□□□□□ -0.61
SPEN-205ENST00000487496 PIH1D1Q9NWS0 290 aaKnown RBP11.22□□□□□ -0.61
SPEN-205ENST00000487496 ZDHHC3Q9NYG2 299 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 NBEAQ8NFP9 2946 aa11.22□□□□□ -0.61
SPEN-205ENST00000487496 IGLV3-16A0A075B6K0 115 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms