RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NUDT4Q9NZJ9 180 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 ZNF225Q9UK10 706 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 PTBP2Q9UKA9 531 aaKnown RBP25.79■■□□□ 1.72
HLA-C-208ENST00000487245 OGDHLQ9ULD0 1010 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 DHRS7Q9Y394 339 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 CENPFP49454 3210 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 KANSL1LA0AUZ9 987 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 MYF6P23409 242 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 CSKP41240 450 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 MAPK8P45983 427 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 GSK3BP49841 420 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 ERVK-8P63133 956 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 NFYCQ13952 458 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 RETSATQ6NUM9 610 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 EPHX4Q8IUS5 362 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 TMEM199Q8N511 208 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 FIBCD1Q8N539 461 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 MYO19Q96H55 970 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 ZNF382Q96SR6 550 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 C2orf49Q9BVC5 232 aaPredicted RBP25.79■■□□□ 1.72
HLA-C-208ENST00000487245 CD274Q9NZQ7 290 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 INSL5Q9Y5Q6 135 aa25.79■■□□□ 1.72
HLA-C-208ENST00000487245 TCRBV5S2A0A599 114 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 DLGAP1O14490 977 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 PRMT5O14744 637 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-208ENST00000487245 PGLSO95336 258 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 OLFM2O95897 454 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 SPATA31D3P0C874 917 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 CDH2P19022 906 aaPredicted RBP25.78■■□□□ 1.72
HLA-C-208ENST00000487245 CSNK1DP48730 415 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 CCT8P50990 548 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 PRR23BQ6ZRT6 265 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 SPATA31D4Q6ZUB0 917 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 TRIML2Q8N7C3 387 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 TOX2Q96NM4 488 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 ETAA1Q9NY74 926 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 LSM7Q9UK45 103 aaKnown RBP25.78■■□□□ 1.72
HLA-C-208ENST00000487245 FCF1Q9Y324 198 aaKnown RBP25.78■■□□□ 1.72
HLA-C-208ENST00000487245 TIMM22Q9Y584 194 aa25.78■■□□□ 1.72
HLA-C-208ENST00000487245 A0A1B0GTW7 788 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 FAM234BA2RU67 622 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 CCDC160A6NGH7 325 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 TRIM64A6NGJ6 449 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 GREM1O60565 184 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 SLC22A3O75751 556 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 SLC39A5Q6ZMH5 540 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 GPRIN3Q6ZVF9 776 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 DDX53Q86TM3 631 aaKnown RBP25.77■■□□□ 1.72
HLA-C-208ENST00000487245 METTL3Q86U44 580 aaKnown RBP25.77■■□□□ 1.72
HLA-C-208ENST00000487245 FAM110BQ8TC76 370 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 ADAMTS19Q8TE59 1207 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 DEFB118Q96PH6 123 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 SPG21Q9NZD8 308 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 EGFL7Q9UHF1 273 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 AURKCQ9UQB9 309 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 ZNF510Q9Y2H8 683 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 SAC3D1A6NKF1 404 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 PLOD2O00469 737 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 RPS3P23396 243 aaKnown RBP eCLIP25.77■■□□□ 1.723e-7■■■■□ 19.9
HLA-C-208ENST00000487245 AGTR2P50052 363 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 HK3P52790 923 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 ECT2LQ008S8 904 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 RBBP7Q16576 425 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 CHCHD4Q8N4Q1 142 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 CBR4Q8N4T8 237 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 TNIP2Q8NFZ5 429 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 PIH1D2Q8WWB5 315 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 ALG2Q9H553 416 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 CAAP1Q9H8G2 361 aa25.77■■□□□ 1.72
HLA-C-208ENST00000487245 TNPO3Q9Y5L0 923 aaKnown RBP25.77■■□□□ 1.72
HLA-C-208ENST00000487245 PLXNA4Q9HCM2 1894 aa25.76■■□□□ 1.72
HLA-C-208ENST00000487245 RASAL1O95294 804 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 ZNF7P17097 686 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 LAG3P18627 525 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 PRDX3P30048 256 aaKnown RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 CLCN7P51798 805 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 POLR2JP52435 117 aaKnown RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 ATN1P54259 1190 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 AASDHQ4L235 1098 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 TMTC4Q5T4D3 741 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 ATXN7L2Q5T6C5 722 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 LYPLAL1Q5VWZ2 237 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 CPNE9Q8IYJ1 553 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 CMTR2Q8IYT2 770 aaKnown RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 ARL14EPQ8N8R7 260 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 ACDQ96AP0 544 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 ZNF689Q96CS4 500 aaPredicted RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 TIMMDC1Q9NPL8 285 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 MRPL17Q9NRX2 175 aaKnown RBP25.76■■□□□ 1.71
HLA-C-208ENST00000487245 ATXN10Q9UBB4 475 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 ST14Q9Y5Y6 855 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 CPQQ9Y646 472 aa25.76■■□□□ 1.71
HLA-C-208ENST00000487245 CCDC154A6NI56 674 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 E2F3O00716 465 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 HTR1EP28566 365 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 CDK9P50750 372 aaKnown RBP25.75■■□□□ 1.71
HLA-C-208ENST00000487245 LIPEQ05469 1076 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 LYSMD3Q7Z3D4 306 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 ADAMTSL2Q86TH1 951 aa25.75■■□□□ 1.71
HLA-C-208ENST00000487245 GPR65Q8IYL9 337 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms