RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CPNE3O75131 537 aaKnown RBP19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 SERPING1P05155 500 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 KDELR1P24390 212 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 PTGIRP43119 386 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 ARL4DP49703 201 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 PDE1BQ01064 536 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 DMPKQ09013 629 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 AP1B1Q10567 949 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 NR1I3Q14994 352 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 NFKBIBQ15653 356 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 DNTTIP2Q5QJE6 756 aaKnown RBP19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 ZFYVE27Q5T4F4 411 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 FAM83HQ6ZRV2 1179 aaPredicted RBP19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 SPATA22Q8NHS9 363 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 SYN2Q92777 582 aaPredicted RBP19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 MR1Q95460 341 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 CD180Q99467 661 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 CBX8Q9HC52 389 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 PSMD13Q9UNM6 376 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 HEY1Q9Y5J3 304 aa19.02■□□□□ 0.64
SMPDL3A-202ENST00000487215 TLCD2A6NGC4 264 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 KCNJ13O60928 360 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 SCRG1O75711 98 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 NDST3O95803 873 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 MT-CYBP00156 380 aaPredicted RBP19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 HSD11B2P80365 405 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 GPS2Q13227 327 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 PLCL1Q15111 1095 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 INPP5JQ15735 1006 aaPredicted RBP19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 CHRNA6Q15825 494 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 SLC14A2Q15849 920 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZNF517Q6ZMY9 492 aaPredicted RBP19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 AMZ2Q86W34 360 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 D2HGDHQ8N465 521 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 BRSK1Q8TDC3 778 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 TTC25Q96NG3 672 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 SRPK1Q96SB4 655 aaKnown RBP19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 XPO4Q9C0E2 1151 aaKnown RBP19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 LUZP4Q9P127 313 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 CTTNBP2NLQ9P2B4 639 aa19.01■□□□□ 0.63
SMPDL3A-202ENST00000487215 MYO9AB2RTY4 2548 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 A0A1W2PQJ5 194 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 UBA6A0AVT1 1052 aaPredicted RBP19■□□□□ 0.63
SMPDL3A-202ENST00000487215 OR5K3A6NET4 321 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 TCP11X1B4DZS4 312 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 POP7O75817 140 aaKnown RBP19■□□□□ 0.63
SMPDL3A-202ENST00000487215 CEACAM4O75871 244 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 LPOP22079 712 aaPredicted RBP19■□□□□ 0.63
SMPDL3A-202ENST00000487215 CTSCP53634 463 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 TUBB4BP68371 445 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 TUBB2AQ13885 445 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 GPR19Q15760 415 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 IZUMO3Q5VZ72 239 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 TMEM126BQ8IUX1 230 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 RASGEF1AQ8N9B8 481 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 Q8NA96 180 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 SLC38A9Q8NBW4 561 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 ADAMTS17Q8TE56 1095 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZNF501Q96CX3 271 aaPredicted RBP19■□□□□ 0.63
SMPDL3A-202ENST00000487215 TUBB2BQ9BVA1 445 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 CHST8Q9H2A9 424 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 IL26Q9NPH9 171 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 CASS4Q9NQ75 786 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 NENFQ9UMX5 172 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZNF451Q9Y4E5 1061 aa19■□□□□ 0.63
SMPDL3A-202ENST00000487215 SHANK1Q9Y566 2161 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 GPR39O43194 453 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 PMPCBO75439 489 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 SERPINC1P01008 464 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 MTHFD1P11586 935 aaKnown RBP18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 HMGCLP35914 325 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 MRPL49Q13405 166 aaKnown RBP18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 NFE2L1Q14494 772 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 EIF2S3LQ2VIR3 472 aaKnown RBP18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 SLC9A4Q6AI14 798 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 CCDC70Q6NSX1 233 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 JMJD6Q6NYC1 403 aaPredicted RBP18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 NPNTQ6UXI9 565 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 B4GALNT4Q76KP1 1039 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 TTC30BQ8N4P2 665 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 OLFM3Q96PB7 478 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 GLOD4Q9HC38 313 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 KCND1Q9NSA2 647 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 IMP3Q9NV31 184 aaKnown RBP18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 HRASLS2Q9NWW9 162 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 UVRAGQ9P2Y5 699 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 PCDHGB7Q9Y5F8 929 aa18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 CFAP20Q9Y6A4 193 aaKnown RBP18.99■□□□□ 0.63
SMPDL3A-202ENST00000487215 LRRD1A4D1F6 860 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 DPM1O60762 260 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 ZBTB11O95625 1053 aaPredicted RBP18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 DDAH2O95865 285 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 CA5AP35218 305 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 PDK1Q15118 436 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 NOMO1Q15155 1222 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 LCN10Q6JVE6 187 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 DUS1LQ6P1R4 473 aaKnown RBP18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 OOSP2Q86WS3 158 aa18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 ENDOVQ8N8Q3 282 aaKnown RBP18.98■□□□□ 0.63
SMPDL3A-202ENST00000487215 FDCSPQ8NFU4 85 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms