RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 EIF3IQ13347 325 aaKnown RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 ADAM9Q13443 819 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 CUL2Q13617 745 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 DPYSQ14117 519 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 SPIDRQ14159 915 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 FRG1Q14331 258 aaKnown RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 LRRC14Q15048 493 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 PLCL1Q15111 1095 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 NR0B2Q15466 257 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 STILQ15468 1287 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 DLG2Q15700 870 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 LINC00303Q3SY05 128 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 ZNF542PQ5EBM4 170 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 RABGAP1LQ5R372 815 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 RAP1GAP2Q684P5 730 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 C8orf74Q6P047 294 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 PGBD2Q6P3X8 592 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 LCLAT1Q6UWP7 414 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 Q6ZSR6 202 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 RAB11FIP2Q7L804 512 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 UBE3DQ7Z6J8 389 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 PTAR1Q7Z6K3 402 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 ABI3BPQ7Z7G0 1075 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 HOOK3Q86VS8 718 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 HEATR4Q86WZ0 1026 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 CHSY1Q86X52 802 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 KRT73Q86Y46 540 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 KRTAP19-1Q8IUB9 90 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 P3H2Q8IVL5 708 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 PPM1NQ8N819 430 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 ATP6V0D2Q8N8Y2 350 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 ZNF548Q8NEK5 533 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 DQX1Q8TE96 717 aaKnown RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 SLC35F5Q8WV83 523 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 SEMA4DQ92854 862 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 KLK6Q92876 244 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 EXTL1Q92935 676 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 ARRDC3Q96B67 414 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 MYEOVQ96EZ4 313 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 BTN2A3PQ96KV6 586 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 HSFY1Q96LI6 401 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 FERD3LQ96RJ6 166 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 WDR24Q96S15 920 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 OR10A4Q9H209 315 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 PDE7BQ9NP56 450 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 SEMA3GQ9NS98 782 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 TBC1D29Q9UFV1 150 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 CLEC4AQ9UMR7 237 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 WDR37Q9Y2I8 494 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 DTNAQ9Y4J8 743 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 RNF114Q9Y508 228 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 PCDHGA7Q9Y5G6 932 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 U3KQA8 63 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 SPTY2D1-AS1A0A0U1RR47 76 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 TCAF2A6NFQ2 919 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 KPNA3O00505 521 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 TTI1O43156 1089 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 AQP9O43315 295 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 AP1G1O43747 822 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 KERAO60938 352 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 SLU7O95391 586 aaKnown RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 S100A9P06702 114 aaKnown RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 PAEPP09466 180 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 SLC2A3P11169 496 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 COL6A2P12110 1019 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 ITGB6P18564 788 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 POU3F2P20265 443 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 TBXAS1P24557 533 aaPredicted RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 SLC5A2P31639 672 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 L1CAMP32004 1257 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 CHRNA3P32297 505 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 RABIFP47224 123 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 MNAT1P51948 309 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 CLDN2P57739 230 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 TAS2R38P59533 333 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 ACY1Q03154 408 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 GPS2Q13227 327 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 CNGA2Q16280 664 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 ZNF284Q2VY69 593 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 TDRD12Q587J7 1177 aaKnown RBP6.79□□□□□ -1.32
HDAC3-209ENST00000486618 PIP5KL1Q5T9C9 394 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 RESP18Q5W5W9 173 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 PMF1Q6P1K2 205 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 GUSBP11Q6P575 273 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 B3GNT6Q6ZMB0 384 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 ZNF783Q6ZMS7 281 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 GCNT7Q6ZNI0 430 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 PARGQ86W56 976 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 GRAMD1CQ8IYS0 662 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 FAM9CQ8IZT9 166 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 SLC22A18ASQ8N1D0 253 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 FBXO39Q8N4B4 442 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 TMIEQ8NEW7 156 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 OR8K3Q8NH51 312 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 CCDC110Q8TBZ0 833 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 LMX1AQ8TE12 382 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 ASB12Q8WXK4 309 aa6.79□□□□□ -1.32
HDAC3-209ENST00000486618 RAPGEF5Q92565 580 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 542.8 ms