RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 TRIP6Q15654 476 aaKnown RBP23.25■■□□□ 1.31
ABCF3-216ENST00000485921 RNF187Q5TA31 235 aaPredicted RBP23.25■■□□□ 1.31
ABCF3-216ENST00000485921 OGFOD3Q6PK18 319 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 PALM2Q8IXS6 379 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 LMNTD2Q8IXW0 634 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 ZDHHC1Q8WTX9 485 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 GLMNQ92990 594 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 CERS2Q96G23 380 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 FAM167BQ9BTA0 163 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 IARS2Q9NSE4 1012 aaKnown RBP23.25■■□□□ 1.31
ABCF3-216ENST00000485921 TBC1D29Q9UFV1 150 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 MGAT4DA6NG13 374 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 QSOX1O00391 747 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 PRMT5O14744 637 aaPredicted RBP23.24■■□□□ 1.31
ABCF3-216ENST00000485921 TNFSF14O43557 240 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 SNX2O60749 519 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 OR56A5P0C7T3 313 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 MYF5P13349 255 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 CEACAM1P13688 526 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 MAGEA4P43358 317 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 NOVA1P51513 510 aaKnown RBP23.24■■□□□ 1.31
ABCF3-216ENST00000485921 DMPKQ09013 629 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 CTBP1Q13363 440 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 CUL1Q13616 776 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 PUM1Q14671 1186 aaKnown RBP eCLIP23.24■■□□□ 1.31
ABCF3-216ENST00000485921 DENND6AQ8IWF6 608 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 SFTPA2Q8IWL1 248 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 SLC35F3Q8IY50 421 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 ARL10Q8N8L6 244 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 OR2L2Q8NH16 312 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 GSDMBQ8TAX9 411 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 CCM2Q9BSQ5 444 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 VPS37BQ9H9H4 285 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 PPANQ9NQ55 473 aaKnown RBP23.24■■□□□ 1.31
ABCF3-216ENST00000485921 NCKIPSDQ9NZQ3 722 aa23.24■■□□□ 1.31
ABCF3-216ENST00000485921 LY6G6EA0A0G2JKS1 128 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 UBA6A0AVT1 1052 aaPredicted RBP23.23■■□□□ 1.31
ABCF3-216ENST00000485921 KLHL33A6NCF5 533 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 PRR19A6NJB7 356 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 F8W8V4 182 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 NOBOXO60393 691 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 KCNK5O95279 499 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 S1PR4O95977 384 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 IDSP22304 550 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 SLC1A2P43004 574 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 DAB2P98082 770 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 FRG1Q14331 258 aaKnown RBP23.23■■□□□ 1.31
ABCF3-216ENST00000485921 NR0B2Q15466 257 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 TRMT10BQ6PF06 316 aaKnown RBP23.23■■□□□ 1.31
ABCF3-216ENST00000485921 CAPN12Q6ZSI9 719 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 LRRC6Q86X45 466 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 KYQ8NBH2 561 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 GABPB2Q8TAK5 448 aaPredicted RBP23.23■■□□□ 1.31
ABCF3-216ENST00000485921 LPGAT1Q92604 370 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 P2RY12Q9H244 342 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 PRDM8Q9NQV8 689 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 INTS10Q9NVR2 710 aaKnown RBP23.23■■□□□ 1.31
ABCF3-216ENST00000485921 FAM8A1Q9UBU6 413 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 FBXO5Q9UKT4 447 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 VPS9D1Q9Y2B5 631 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 U3KQA8 63 aa23.23■■□□□ 1.31
ABCF3-216ENST00000485921 COL5A1P20908 1838 aaPredicted RBP23.22■■□□□ 1.31
ABCF3-216ENST00000485921 PCNX2A6NKB5 2137 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 GIPC1O14908 333 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 SLU7O95391 586 aaKnown RBP23.22■■□□□ 1.31
ABCF3-216ENST00000485921 EML2O95834 649 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 CKMT1AP12532 417 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 CKMT2P17540 419 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 RPS3P23396 243 aaKnown RBP eCLIP23.22■■□□□ 1.31
ABCF3-216ENST00000485921 ECHS1P30084 290 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 RPIAP49247 311 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 EIF3BP55884 814 aaKnown RBP23.22■■□□□ 1.31
ABCF3-216ENST00000485921 DNAJC3Q13217 504 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 NFE2L1Q14494 772 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 FAM83HQ6ZRV2 1179 aaPredicted RBP23.22■■□□□ 1.31
ABCF3-216ENST00000485921 CEP128Q6ZU80 1094 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 GLRX5Q86SX6 157 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 NAGSQ8N159 534 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 GPR156Q8NFN8 814 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 C9orf72Q96LT7 481 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 FMO2Q99518 471 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 FBXO6Q9NRD1 293 aaPredicted RBP23.22■■□□□ 1.31
ABCF3-216ENST00000485921 EVA1BQ9NVM1 165 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 CRYL1Q9Y2S2 319 aa23.22■■□□□ 1.31
ABCF3-216ENST00000485921 C17orf113A0A1B0GUU1 675 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 SPAARA0A1B0GVQ0 90 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 A6NCN8 305 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 FTH1P02794 183 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 F7P08709 466 aaPredicted RBP23.21■■□□□ 1.31
ABCF3-216ENST00000485921 GSTM1P09488 218 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 SSTR1P30872 391 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 ID4P47928 161 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 DUSP3P51452 185 aaPredicted RBP23.21■■□□□ 1.31
ABCF3-216ENST00000485921 GSTM4Q03013 218 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 SEPT7Q16181 437 aaKnown RBP23.21■■□□□ 1.31
ABCF3-216ENST00000485921 C14orf28Q4W4Y0 310 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 ZNF789Q5FWF6 425 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 PTRHD1Q6GMV3 140 aaKnown RBP23.21■■□□□ 1.31
ABCF3-216ENST00000485921 CNTN4Q8IWV2 1026 aa23.21■■□□□ 1.31
ABCF3-216ENST00000485921 CFAP206Q8IYR0 622 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms