RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	SIRPA	P78324	504 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	RBP5	P82980	135 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	CXCL9	Q07325	125 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	SREBF2	Q12772	1141 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	PKN2	Q16513	984 aa	Known RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	IGSF11	Q5DX21	431 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	PPP6R3	Q5H9R7	873 aa	Predicted RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	ARMC4	Q5T2S8	1044 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	NUGGC	Q68CJ6	796 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	IL27RA	Q6UWB1	636 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	PET117	Q6UWS5	81 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	HAPLN4	Q86UW8	402 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	HJURP	Q8NCD3	748 aa	Predicted RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	MAGEC3	Q8TD91	643 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	ADAMTS14	Q8WXS8	1223 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	DNAAF4	Q8WXU2	420 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	FAM162A	Q96A26	154 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	VPS33A	Q96AX1	596 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	HDAC11	Q96DB2	347 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	ZNF479	Q96JC4	524 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	EGFL8	Q99944	293 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	WDR77	Q9BQA1	342 aa	Predicted RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	SPATC1L	Q9H0A9	340 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	MKKS	Q9NPJ1	570 aa	Predicted RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	MTMR10	Q9NXD2	777 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	GDE1	Q9NZC3	331 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	OR14J1	Q9UGF5	321 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	DBNL	Q9UJU6	430 aa	Known RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	RCOR1	Q9UKL0	485 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	GTF3C4	Q9UKN8	822 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	PADI1	Q9ULC6	663 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	PLAGL1	Q9UM63	463 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	YTHDC2	Q9H6S0	1430 aa	Known RBP	3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	C1orf226	A1L170	272 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	MS4A18	H0YCH9	400 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	VWA5A	O00534	786 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	ADAMDEC1	O15204	470 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	TUBB	P07437	444 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	GLUL	P15104	373 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	CPT2	P23786	658 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	FASLG	P48023	281 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	RAB28	P51157	221 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	CCR3	P51677	355 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	ZP1	P60852	638 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	PLIN5	Q00G26	463 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	MAD2L1	Q13257	205 aa	Predicted RBP	3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SNAPC1	Q16533	368 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	DUSP6	Q16828	381 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	ZNF805	Q5CZA5	627 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	DCST1	Q5T197	706 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	LRIF1	Q5T3J3	769 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	LCE3C	Q5T5A8	94 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	TMEM71	Q6P5X7	295 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	COLCA1	Q6ZS62	124 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SLC16A12	Q6ZSM3	486 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	ERN2	Q76MJ5	926 aa	Known RBP	3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	TAOK1	Q7L7X3	1001 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	PIM3	Q86V86	326 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	DSEL	Q8IZU8	1212 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	MMP21	Q8N119	569 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	CCAR2	Q8N163	923 aa	Known RBP	3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SPATA6L	Q8N4H0	392 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SETD6	Q8TBK2	473 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	DEPDC1B	Q8WUY9	529 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	TRIB2	Q92519	343 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SMC6	Q96SB8	1091 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	GAD1	Q99259	594 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SLC25A23	Q9BV35	468 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	MAP6D1	Q9H9H5	199 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	GRPEL1	Q9HAV7	217 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SELENON	Q9NZV5	590 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	MSRB1	Q9NZV6	116 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	TUBE1	Q9UJT0	475 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	GPATCH8	Q9UKJ3	1502 aa	Known RBP	3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SOS1	Q07889	1333 aa	Predicted RBP	3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	ABCA6	Q8N139	1617 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	KIF15	Q9NS87	1388 aa		3.88	□□□□□ -1.79
VPS8-223	ENST00000485024	SZT2	Q5T011	3432 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	SLIT1	O75093	1534 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	KCP	Q6ZWJ8	1503 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CPED1	A4D0V7	1026 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	MAGEB17	A8MXT2	336 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	KDM4E	B2RXH2	506 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024		H0YGN5	161 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024		H3BQ06	376 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	VCY	O14598	125 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	ATP2A1	O14983	1001 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	ASAP2	O43150	1006 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	PRAMEF11	O60813	436 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	RECQL5	O94762	991 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CHRNB1	P11230	501 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	FDPS	P14324	419 aa	Known RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	ARSB	P15848	533 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	TCEA1	P23193	301 aa	Known RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	MMP14	P50281	582 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CSNK2A1	P68400	391 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	TMF1	P82094	1093 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	ECT2L	Q008S8	904 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	FOXM1	Q08050	763 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms