RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 BCL7AQ4VC05 210 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 AGAP9Q5VTM2 703 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 PAPD7Q5XG87 772 aaKnown RBP18.79■□□□□ 0.6
SNX17-206ENST00000484886 LRRC8BQ6P9F7 803 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 FAM83HQ6ZRV2 1179 aaPredicted RBP18.79■□□□□ 0.6
SNX17-206ENST00000484886 PIANPQ8IYJ0 282 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 C17orf53Q8N3J3 647 aaPredicted RBP18.79■□□□□ 0.6
SNX17-206ENST00000484886 WDR36Q8NI36 951 aaKnown RBP18.79■□□□□ 0.6
SNX17-206ENST00000484886 ZNF778Q96MU6 729 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 TTC1Q99614 292 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.79■□□□□ 0.6
SNX17-206ENST00000484886 DDX47Q9H0S4 455 aaKnown RBP18.79■□□□□ 0.6
SNX17-206ENST00000484886 VPS37BQ9H9H4 285 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 CHRAC1Q9NRG0 131 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 RIMKLBQ9ULI2 386 aa18.79■□□□□ 0.6
SNX17-206ENST00000484886 MGAT4DA6NG13 374 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 OR52A4PA6NMU1 304 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 XRCC1P18887 633 aaPredicted RBP18.78■□□□□ 0.6
SNX17-206ENST00000484886 FOXN2P32314 431 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 LSSP48449 732 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 UBE2IP63279 158 aaKnown RBP18.78■□□□□ 0.6
SNX17-206ENST00000484886 GPLD1P80108 840 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 DMPKQ09013 629 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 FASTKD1Q53R41 847 aaKnown RBP18.78■□□□□ 0.6
SNX17-206ENST00000484886 ANKRD22Q5VYY1 191 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 CASC4Q6P4E1 433 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 WASH2PQ6VEQ5 465 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 PROSER1Q86XN7 944 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 OR2L2Q8NH16 312 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 OR4L1Q8NH43 312 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 NUDT22Q9BRQ3 303 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 WASH6PQ9NQA3 447 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 SYBUQ9NX95 663 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 ZNF624Q9P2J8 865 aaPredicted RBP18.78■□□□□ 0.6
SNX17-206ENST00000484886 DKK4Q9UBT3 224 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 ASIC3Q9UHC3 531 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 ANAPC5Q9UJX4 755 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 WDR37Q9Y2I8 494 aa18.78■□□□□ 0.6
SNX17-206ENST00000484886 KLHL33A6NCF5 533 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 PRR19A6NJB7 356 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 GOLGA8MH3BSY2 632 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 POLBP06746 335 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 BRAFP15056 766 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 PSMA3P25788 255 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 RBMS1P29558 406 aaKnown RBP18.77■□□□□ 0.6
SNX17-206ENST00000484886 CCKBRP32239 447 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 SLC19A1P41440 591 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 PAFAH1B1P43034 410 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 PRLHRP49683 370 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 CLCA4Q14CN2 919 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 LYPLAL1Q5VWZ2 237 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 ABRAXAS1Q6UWZ7 409 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 RAB11FIP2Q7L804 512 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 TMPRSS9Q7Z410 1059 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 KLHL7Q8IXQ5 586 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 CFAP206Q8IYR0 622 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 LSMEM2Q8N112 164 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 CLDN19Q8N6F1 224 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 OTUD6BQ8N6M0 293 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 CPT1BQ92523 772 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 LIN37Q96GY3 246 aaPredicted RBP18.77■□□□□ 0.6
SNX17-206ENST00000484886 TBC1D10AQ9BXI6 508 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 WWP1Q9H0M0 922 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 SEMA6CQ9H3T2 930 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 POT1Q9NUX5 634 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 SAMD15Q9P1V8 674 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 RAXQ9Y2V3 346 aa18.77■□□□□ 0.6
SNX17-206ENST00000484886 IGLV3-16A0A075B6K0 115 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 SGTAO43765 313 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 AVILO75366 819 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 CAPNS1P04632 268 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 SLC35G4P0C7Q5 338 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 JMJD7P0C870 316 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 MPSTP25325 297 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 PPARGP37231 505 aaPredicted RBP18.76■□□□□ 0.59
SNX17-206ENST00000484886 NSG1P42857 185 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 EPHA4P54764 986 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 ACVR1Q04771 509 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 ITIH4Q14624 930 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 CLPPQ16740 277 aaPredicted RBP18.76■□□□□ 0.59
SNX17-206ENST00000484886 METRNLQ641Q3 311 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 TMEM26Q6ZUK4 368 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 ZNF534Q76KX8 674 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 CREG2Q8IUH2 290 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 FBXO39Q8N4B4 442 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 HM13Q8TCT9 377 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 NCSTNQ92542 709 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 PEX13Q92968 403 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 CCDC74BQ96LY2 380 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 DCBLD2Q96PD2 775 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 DPYSL5Q9BPU6 564 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 CCM2Q9BSQ5 444 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 CATSPERZQ9NTU4 200 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 IMP3Q9NV31 184 aaKnown RBP18.76■□□□□ 0.59
SNX17-206ENST00000484886 AKAP7Q9P0M2 348 aaPredicted RBP18.76■□□□□ 0.59
SNX17-206ENST00000484886 ACSL5Q9ULC5 683 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 BPTFQ12830 3046 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 KIF26BQ2KJY2 2108 aa18.76■□□□□ 0.59
SNX17-206ENST00000484886 PMS2P1A4D2B8 440 aa18.75■□□□□ 0.59
SNX17-206ENST00000484886 LILRA5A6NI73 299 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms