RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SF3A3Q12874 501 aaKnown RBP eCLIP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 BNIP3Q12983 259 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 STX3Q13277 289 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CTBP1Q13363 440 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GALNT3Q14435 633 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 IHHQ14623 411 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GRM3Q14832 879 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CHI3L2Q15782 390 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 TSNAXIP1Q2TAA8 658 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 ZNF284Q2VY69 593 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 MYLK3Q32MK0 819 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 FASTKD1Q53R41 847 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 FAM46CQ5VWP2 391 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 FBXL19Q6PCT2 694 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GDPD4Q6W3E5 623 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GCNT7Q6ZNI0 430 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 OTOAQ7RTW8 1153 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GLT6D1Q7Z4J2 308 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CMC1Q7Z7K0 106 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 TBC1D1Q86TI0 1168 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CRLF3Q8IUI8 442 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 NAXDQ8IW45 347 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 SLC22A18ASQ8N1D0 253 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GPATCH11Q8N954 259 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 TMIEQ8NEW7 156 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 OR13H1Q8NG92 308 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 RDH11Q8TC12 318 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 PPP4R1Q8TF05 950 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 SETD7Q8WTS6 366 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 PDCD6IPQ8WUM4 868 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 ELMO2Q96JJ3 720 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 SIKE1Q9BRV8 207 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 TDRD1Q9BXT4 1180 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 FAM96AQ9H5X1 160 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 NMRAL1Q9HBL8 299 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 SLCO1B3Q9NPD5 702 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 TM7SF3Q9NS93 570 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 SLC2A6Q9UGQ3 507 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CORO1CQ9ULV4 474 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CHKBQ9Y259 395 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 MTO1Q9Y2Z2 717 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 ACOT9Q9Y305 439 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 RAI2Q9Y5P3 530 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 FADS3Q9Y5Q0 445 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 MYLKQ15746 1914 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 PCNX2A6NKB5 2137 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 POM121BA6NF01 834 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 H0YHG0 523 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 LDB2O43679 373 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 AHSGP02765 367 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 C2P06681 752 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 SYPP08247 313 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 ADRB1P08588 477 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 MYF5P13349 255 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 CPA3P15088 417 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 CR2P20023 1033 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 OGNP20774 298 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 PMLP29590 882 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 SLC1A2P43004 574 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 LEPRP48357 1165 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 CCR5P51681 352 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 ARFIP2P53365 341 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 C21orf59P57076 290 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 CORO7P57737 925 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 NXPH1P58417 271 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 RACK1P63244 317 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 SIM1P81133 766 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 MPP1Q00013 466 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 RAD51Q06609 339 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 BCL2L1Q07817 233 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 ELOAQ14241 798 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 TAF1AQ15573 450 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 ZNF805Q5CZA5 627 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 ARMC12Q5T9G4 340 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 KLC3Q6P597 504 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 AFTPHQ6ULP2 937 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 LYPD8Q6UX82 237 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 LIAT1Q6ZQX7 453 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 ERMP1Q7Z2K6 904 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 PTAR1Q7Z6K3 402 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 PIP4P1Q86T03 277 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 TRIM69Q86WT6 500 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 HORMAD1Q86X24 394 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 CILP2Q8IUL8 1156 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 WDR75Q8IWA0 830 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 DENND6AQ8IWF6 608 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 PELI3Q8N2H9 469 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 LPCAT1Q8NF37 534 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 OR13J1Q8NGT2 312 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 OR4L1Q8NH43 312 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 HDAC10Q969S8 669 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 PPP1R16AQ96I34 528 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 SCYL1Q96KG9 808 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 C7orf26Q96N11 449 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 LRRC37BQ96QE4 947 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 HDAC8Q9BY41 377 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 CCDC68Q9H2F9 335 aa6.86□□□□□ -1.31
BRCA1-216ENST00000484087 C12orf65Q9H3J6 166 aaKnown RBP6.86□□□□□ -1.31
BRCA1-216ENST00000484087 NPHS2Q9NP85 383 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms