RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CCDC126Q96EE4 140 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 PTCD3Q96EY7 689 aaKnown RBP7.7□□□□□ -1.18
SNX13-208ENST00000482558 TSPAN17Q96FV3 270 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 ZNF599Q96NL3 588 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 GPR22Q99680 433 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 PAAF1Q9BRP4 392 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 MLPHQ9BV36 600 aaPredicted RBP7.7□□□□□ -1.18
SNX13-208ENST00000482558 TBC1D10AQ9BXI6 508 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 FSD1LQ9BXM9 530 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 SLC12A9Q9BXP2 914 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 ZYG11BQ9C0D3 744 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 DCLRE1BQ9H816 532 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 KCNK12Q9HB15 430 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 PREBQ9HCU5 417 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 OBP2BQ9NPH6 170 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 SNX15Q9NRS6 342 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 C20orf96Q9NUD7 363 aaPredicted RBP7.7□□□□□ -1.18
SNX13-208ENST00000482558 TMEM30AQ9NV96 361 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 TMEM248Q9NWD8 314 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 HSFX1Q9UBD0 423 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 COPG2Q9UBF2 871 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 HAO1Q9UJM8 370 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 HBS1LQ9Y450 684 aaKnown RBP7.7□□□□□ -1.18
SNX13-208ENST00000482558 PCDHB7Q9Y5E2 793 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 PTPRDP23468 1912 aa7.7□□□□□ -1.18
SNX13-208ENST00000482558 IGLV3-10A0A075B6K4 115 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 A0A087X1B8 175 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 A0A096LPK6 155 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SLC12A8A0AV02 714 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 DRGXA6NNA5 263 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 F8W8V4 182 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SPECC1L-ADORA2AF8WAN1 911 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 FCHO1O14526 889 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 AURKAO14965 403 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 UGT1A9O60656 530 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 TRIM13O60858 407 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 EPOP01588 193 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 T-ENOLP0DO92 83 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 ERVK-10P10266 1014 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 AOC1P19801 751 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 CD40P25942 277 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 CCND3P30281 292 aaPredicted RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 ADRA1AP35348 466 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 LTBRP36941 435 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SERPINF1P36955 418 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SLC26A3P40879 764 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 OR1G1P47890 313 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SEPHS1P49903 392 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 AQP5P55064 265 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 ABCE1P61221 599 aaKnown RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 EGR3Q06889 387 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 OVGP1Q12889 678 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 ZBTB17Q13105 803 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 GPR17Q13304 367 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 THOC5Q13769 683 aaKnown RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 CRY1Q16526 586 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 CTXN3Q4LDR2 81 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 FSTL4Q6MZW2 842 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 GALNTL5Q7Z4T8 443 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SCD5Q86SK9 330 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SDCCAG8Q86SQ7 713 aaPredicted RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 CLEC14AQ86T13 490 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 LONP2Q86WA8 852 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 CEP57Q86XR8 500 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 ARID3BQ8IVW6 561 aaPredicted RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 SCN4BQ8IWT1 228 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 ARHGAP12Q8IWW6 846 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 ZZZ3Q8IYH5 903 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 DCLK2Q8N568 766 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 ENDOVQ8N8Q3 282 aaKnown RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 PDZD8Q8NEN9 1154 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 RAET1EQ8TD07 263 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 PDCD6IPQ8WUM4 868 aaKnown RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 MYLIPQ8WY64 445 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 HERVK_113Q902F9 699 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SEPT8Q92599 483 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 MUL1Q969V5 352 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 AZIN2Q96A70 460 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 CMTM5Q96DZ9 223 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 VPS39Q96JC1 886 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 RILPQ96NA2 401 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 FCRL3Q96P31 734 aaPredicted RBP7.69□□□□□ -1.18
SNX13-208ENST00000482558 GORASP1Q9BQQ3 440 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 MCMBPQ9BTE3 642 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 CDADC1Q9BWV3 514 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SIK2Q9H0K1 926 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 ABCG4Q9H172 646 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 GHITMQ9H3K2 345 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 EBF2Q9HAK2 575 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 UGT1A7Q9HAW7 530 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 UGT1A10Q9HAW8 530 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 UGT1A8Q9HAW9 530 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 NMRAL1Q9HBL8 299 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 TMLHEQ9NVH6 421 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 RBM22Q9NW64 420 aaKnown RBP eCLIP7.69□□□□□ -1.18
SNX13-208ENST00000482558 OSER1Q9NX31 292 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 SLAMF8Q9P0V8 285 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 MTRRQ9UBK8 725 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 VPS28Q9UK41 221 aa7.69□□□□□ -1.18
SNX13-208ENST00000482558 OGDHLQ9ULD0 1010 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms