RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 WWOXQ9NZC7 414 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 KRBA1A5PL33 1030 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 CXCL11O14625 94 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 PFDN6O15212 129 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 TBX1O43435 398 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 MITFO75030 526 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 NDUFS2O75306 463 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 BCAS1O75363 584 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 TRIM32Q13049 653 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 GTDC1Q4AE62 458 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 SULT1C3Q6IMI6 304 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 NANOGNBQ7Z5D8 188 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 LRRTM3Q86VH5 581 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 RAVER1Q8IY67 606 aaKnown RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 MFSD2AQ8NA29 543 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 KCNN1Q92952 543 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 FBXO32Q969P5 355 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 TPD52L3Q96J77 140 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 IL12RB2Q99665 862 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 ZYG11BQ9C0D3 744 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 TBCCD1Q9NVR7 557 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 TUBA8Q9NY65 449 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 ARL5CA6NH57 179 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 ADAM23O75077 832 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 RECQL5O94762 991 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 MBL2P11226 248 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 PSEN2P49810 448 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 SCAPQ12770 1279 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 C6orf136Q5SQH8 315 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 ZNF772Q68DY9 489 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 CXCL17Q6UXB2 119 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 AHSA2Q719I0 299 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 P3H2Q8IVL5 708 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 ZFP90Q8TF47 636 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 MAGED4Q96JG8 741 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 CINPQ9BW66 212 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 YIPF2Q9BWQ6 316 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 UGT2B28Q9BY64 529 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 ASPSCR1Q9BZE9 553 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 EXOSC4Q9NPD3 245 aaKnown RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 SDR39U1Q9NRG7 319 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 SNX8Q9Y5X2 465 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 OAS3Q9Y6K5 1087 aaKnown RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 C2orf81A6NN90 581 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 UPK3BL1B0FP48 263 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 UPK3BL2E5RIL1 263 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 HSD17B1P14061 328 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 THPOP40225 353 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 NCS1P62166 190 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 CD47Q08722 323 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 SEMA3AQ14563 771 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 ZNF846Q147U1 533 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 ZNF549Q6P9A3 640 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 LINGO4Q6UY18 593 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 CYHR1Q6ZMK1 362 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 C16orf59Q7L2K0 433 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 HID1Q8IV36 788 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 LGI2Q8N0V4 545 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 ZNF420Q8TAQ5 688 aaPredicted RBP12.56□□□□□ -0.4
VPS52-218ENST00000482399 PTCD2Q8WV60 388 aaKnown RBP12.56□□□□□ -0.4
VPS52-218ENST00000482399 CGREF1Q99674 301 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 GPR63Q9BZJ6 419 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 C3orf18Q9UK00 162 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 ZNF232Q9UNY5 417 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 DLGAP1O14490 977 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 NBNO60934 754 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 ABCB7O75027 752 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 MYO1DO94832 1006 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 MFN2O95140 757 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 CTPS1P17812 591 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 IDUAP35475 653 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 ALDH3A2P51648 485 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 CASP9P55211 416 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 SLC22A16Q86VW1 577 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 HORMAD1Q86X24 394 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 CCDC97Q96F63 343 aaPredicted RBP12.56□□□□□ -0.4
VPS52-218ENST00000482399 FAM193BQ96PV7 902 aaPredicted RBP12.56□□□□□ -0.4
VPS52-218ENST00000482399 ASB2Q96Q27 587 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 OR52E6Q96RD3 313 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 REXO4Q9GZR2 422 aaKnown RBP12.56□□□□□ -0.4
VPS52-218ENST00000482399 GMIPQ9P107 970 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 FKBPLQ9UIM3 349 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 MAGEL2Q9UJ55 1249 aa12.56□□□□□ -0.4
VPS52-218ENST00000482399 GPC6Q9Y625 555 aaPredicted RBP12.56□□□□□ -0.4
VPS52-218ENST00000482399 DNAJC25-GNG10A0A024R161 153 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 BCKDKO14874 412 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 LSM1O15116 133 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 RGS5O15539 181 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 CPSF4O95639 269 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 NTRK1P04629 796 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 ABCB1P08183 1280 aaPredicted RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 RAP2AP10114 183 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 MC4RP32245 332 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 PIGAP37287 484 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 IDH2P48735 452 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 POLD2P49005 469 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 MRPS15P82914 257 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 CDC42EP1Q00587 391 aa12.55□□□□□ -0.4
VPS52-218ENST00000482399 MAPRE1Q15691 268 aaKnown RBP12.55□□□□□ -0.4
VPS52-218ENST00000482399 C6orf141Q5SZD1 244 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms