RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ITGA9Q13797 1035 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 SEPT6Q14141 434 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 TAF1AQ15573 450 aaPredicted RBP10.28□□□□□ -0.76
CPSF4-212ENST00000482251 LDLRAP1Q5SW96 308 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 DCAF12Q5T6F0 453 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ZDHHC20Q5W0Z9 365 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 IRGCQ6NXR0 463 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ARHGEF18Q6ZSZ5 1173 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 FAM92BQ6ZTR7 304 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ARHGAP22Q7Z5H3 698 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 AMZ2Q86W34 360 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 UBL4BQ8N7F7 174 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 BMPERQ8N8U9 685 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 AVL9Q8NBF6 648 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ATG4AQ8WYN0 398 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 SGF29Q96ES7 293 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ELMO2Q96JJ3 720 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 DDA1Q9BW61 102 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 FAM96AQ9H5X1 160 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 ASB8Q9H765 288 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 POT1Q9NUX5 634 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 IMP3Q9NV31 184 aaKnown RBP10.28□□□□□ -0.76
CPSF4-212ENST00000482251 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.28□□□□□ -0.76
CPSF4-212ENST00000482251 CRLS1Q9UJA2 301 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 EFR3BQ9Y2G0 817 aa10.28□□□□□ -0.76
CPSF4-212ENST00000482251 AAR2Q9Y312 384 aaKnown RBP10.28□□□□□ -0.76
CPSF4-212ENST00000482251 KALRNO60229 2985 aa10.27□□□□□ -0.76
CPSF4-212ENST00000482251 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 C2orf81A6NN90 581 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 B4E171 279 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 CAPN5O15484 640 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-212ENST00000482251 KIF1CO43896 1103 aaKnown RBP10.27□□□□□ -0.77
CPSF4-212ENST00000482251 SRP72O76094 671 aaKnown RBP10.27□□□□□ -0.77
CPSF4-212ENST00000482251 PRSS56P0CW18 603 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 LIFP15018 202 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 TSPAN7P41732 249 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 CAPZBP47756 277 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 ZNF140P52738 457 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-212ENST00000482251 RAB15P59190 212 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 SH3BP2P78314 561 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 FOXM1Q08050 763 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 PLCL1Q15111 1095 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 ABRAXAS1Q6UWZ7 409 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 RANBP10Q6VN20 620 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 PLXDC1Q8IUK5 500 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 UNC5BQ8IZJ1 945 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 CACNA2D3Q8IZS8 1091 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 SYCE1Q8N0S2 351 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 LILRA3Q8N6C8 439 aaPredicted RBP10.27□□□□□ -0.77
CPSF4-212ENST00000482251 ZNF398Q8TD17 642 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 BRSK1Q8TDC3 778 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 NKD1Q969G9 470 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 RTP4Q96DX8 246 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 DNAJC1Q96KC8 554 aaKnown RBP10.27□□□□□ -0.77
CPSF4-212ENST00000482251 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
CPSF4-212ENST00000482251 C9orf72Q96LT7 481 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 TMEM121Q9BTD3 319 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 SLC40A1Q9NP59 571 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 SMOXQ9NWM0 555 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 PDP2Q9P2J9 529 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 PCDHGA3Q9Y5H0 932 aa10.27□□□□□ -0.77
CPSF4-212ENST00000482251 MIF4GDA9UHW6 222 aaKnown RBP10.26□□□□□ -0.77
CPSF4-212ENST00000482251 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-212ENST00000482251 PYCARD-AS1I3L0S3 204 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 PPFIA2O75334 1257 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 STK17BO94768 372 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 ZIC2O95409 532 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-212ENST00000482251 METTL18O95568 372 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 CRTAMO95727 393 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 FAM87AP0C7U9 286 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 TPH1P17752 444 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 CDC25BP30305 580 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 CDKN1CP49918 316 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-212ENST00000482251 MC2RQ01718 297 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 DMPKQ09013 629 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 KLF1Q13351 362 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-212ENST00000482251 POU6F1Q14863 301 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 RPE65Q16518 533 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 LONRF2Q1L5Z9 754 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 LINC00303Q3SY05 128 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 AGAP9Q5VTM2 703 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 DENND5AQ6IQ26 1287 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 CEACAM20Q6UY09 585 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 ZSCAN1Q8NBB4 408 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 LSM14AQ8ND56 463 aaKnown RBP10.26□□□□□ -0.77
CPSF4-212ENST00000482251 SPDYE1Q8NFV5 336 aaPredicted RBP10.26□□□□□ -0.77
CPSF4-212ENST00000482251 ARHGAP9Q9BRR9 750 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 ASPSCR1Q9BZE9 553 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 WWP1Q9H0M0 922 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 EPB41L1Q9H4G0 881 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 UCK1Q9HA47 277 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 SIDT1Q9NXL6 827 aaKnown RBP10.26□□□□□ -0.77
CPSF4-212ENST00000482251 IMPACTQ9P2X3 320 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 GUCA1BQ9UMX6 200 aa10.26□□□□□ -0.77
CPSF4-212ENST00000482251 C5orf60A6NFR6 353 aa10.25□□□□□ -0.77
CPSF4-212ENST00000482251 POLR1CO15160 346 aaPredicted RBP10.25□□□□□ -0.77
CPSF4-212ENST00000482251 LDB2O43679 373 aa10.25□□□□□ -0.77
CPSF4-212ENST00000482251 C9P02748 559 aa10.25□□□□□ -0.77
CPSF4-212ENST00000482251 POLBP06746 335 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms