RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 C2orf16Q68DN1 1984 aa14.27□□□□□ -0.12
CHD3-211ENST00000481999 EME2A4GXA9 379 aaPredicted RBP14.27□□□□□ -0.13
CHD3-211ENST00000481999 TRIM38O00635 465 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 CTSLP07711 333 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 MSX2P35548 267 aaPredicted RBP14.27□□□□□ -0.13
CHD3-211ENST00000481999 NRIP1P48552 1158 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 CREB5Q02930 508 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 CACNG1Q06432 222 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 RAD51Q06609 339 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 GALNT1Q10472 559 aaPredicted RBP14.27□□□□□ -0.13
CHD3-211ENST00000481999 PTK2BQ14289 1009 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 DET1Q7L5Y6 550 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 SLC22A9Q8IVM8 553 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 RNF148Q8N7C7 305 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 OR9I1Q8NGQ6 314 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 SMG7Q92540 1137 aaKnown RBP14.27□□□□□ -0.13
CHD3-211ENST00000481999 KIAA1191Q96A73 305 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 PLEKHG4BQ96PX9 1271 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 CDK15Q96Q40 435 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 MEAF6Q9HAF1 191 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 HACD3Q9P035 362 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 EPS15L1Q9UBC2 864 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 RAB26Q9ULW5 256 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 BTRCQ9Y297 605 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 TIMM22Q9Y584 194 aa14.27□□□□□ -0.13
CHD3-211ENST00000481999 C15orf38-AP3S2A0A0A6YYH1 394 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 GLYATL1P3A0A0U1RQE8 302 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 STX16-NPEPL1H3BU86 382 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 ACOT8O14734 319 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 VPS26AO75436 327 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 GPM6BQ13491 265 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 SQLEQ14534 574 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 FBXL19Q6PCT2 694 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 SCIMPQ6UWF3 145 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 ARPINQ7Z6K5 226 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 HMGCLL1Q8TB92 370 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 SCAMP4Q969E2 229 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 HBEGFQ99075 208 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 TCF12Q99081 682 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 TRMOQ9BU70 441 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 DERL2Q9GZP9 239 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 B4GALT6Q9UBX8 382 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 SLC25A13Q9UJS0 675 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 TRAF6Q9Y4K3 522 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 DNAJC15Q9Y5T4 150 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 ATG2AQ2TAZ0 1938 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 PRSS51A0A1B0GVH4 220 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 EPOPA6NHQ4 379 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 C5orf67F2Z3F1 127 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 PRMT5O14744 637 aaPredicted RBP14.26□□□□□ -0.13
CHD3-211ENST00000481999 UBDO15205 165 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 XYLBO75191 536 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 LEFTY1O75610 366 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 GUCA1CO95843 209 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 PABPC4LP0CB38 370 aaKnown RBP14.26□□□□□ -0.13
CHD3-211ENST00000481999 SLC26A3P40879 764 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 PSMD8P48556 350 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 NME5P56597 212 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 TLR1Q15399 786 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 ATP13A5Q4VNC0 1218 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 GK5Q6ZS86 529 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 PHOSPHO2Q8TCD6 241 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 BRD9Q9H8M2 597 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 ZNF225Q9UK10 706 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 BRWD1Q9NSI6 2320 aa14.26□□□□□ -0.13
CHD3-211ENST00000481999 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 KERAO60938 352 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 SOCS5O75159 536 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 CYP17A1P05093 508 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 GSTT1P30711 240 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 PTGER3P43115 390 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 MAGEA10P43363 369 aaPredicted RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 HSPA13P48723 471 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 CLCN2P51788 898 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 PSME3P61289 254 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 DHCR24Q15392 516 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 CNPY1Q3B7I2 92 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 CARD16Q5EG05 197 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 ZNF648Q5T619 568 aaPredicted RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 PTRHD1Q6GMV3 140 aaKnown RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 TICAM1Q8IUC6 712 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 STAG3L4Q8TBR4 150 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 KCNJ9Q92806 393 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 ECHDC3Q96DC8 303 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 ASB9Q96DX5 294 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 L3HYPDHQ96EM0 354 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 TFB2MQ9H5Q4 396 aaKnown RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 IGFLR1Q9H665 355 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 COPS7BQ9H9Q2 264 aaPredicted RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 ADA2Q9NZK5 511 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 SUCOQ9UBS9 1254 aaKnown RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 EIF2B4Q9UI10 523 aaKnown RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 CRLS1Q9UJA2 301 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 ITM2BQ9Y287 266 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 PSMD12O00232 456 aaPredicted RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 DNAJA2O60884 412 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 SLC25A14O95258 325 aaPredicted RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 HLA-EP13747 358 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 SLC6A11P48066 632 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms