RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 CCDC38Q502W7 563 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 TMEM71Q6P5X7 295 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 C4orf22Q6V702 233 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 CLEC14AQ86T13 490 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 JAMLQ86YT9 394 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 BEND7Q8N7W2 519 aaPredicted RBP18.39■□□□□ 0.53
HSPG2-210ENST00000481644 RCBTB1Q8NDN9 531 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 NAT14Q8WUY8 206 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 HEXDCQ8WVB3 486 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 CXorf40BQ96DE9 158 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 CDKN2AIPNLQ96HQ2 116 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 PBKQ96KB5 322 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 TBC1D10AQ9BXI6 508 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 UCK1Q9HA47 277 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 POT1Q9NUX5 634 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 TMEM9Q9P0T7 183 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 LHX6Q9UPM6 363 aa18.39■□□□□ 0.53
HSPG2-210ENST00000481644 HEATR9A2RTY3 570 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 LILRA5A6NI73 299 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 OR52A4PA6NMU1 304 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 HGSO14964 777 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-210ENST00000481644 THRAP10827 490 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 ITIH1P19827 911 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 MPSTP25325 297 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 CDKN1CP49918 316 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-210ENST00000481644 BASP1P80723 227 aaKnown RBP18.38■□□□□ 0.53
HSPG2-210ENST00000481644 LAMB3Q13751 1172 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 NFE2L1Q14494 772 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 CLCA4Q14CN2 919 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 SKIDA1Q1XH10 827 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 BCL7AQ4VC05 210 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 FAM83HQ6ZRV2 1179 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-210ENST00000481644 TMEM26Q6ZUK4 368 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 MICALCLQ6ZW33 695 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 TAS2R42Q7RTR8 314 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 SLC35F6Q8N357 371 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 PRELID2Q8N945 189 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 KCNE4Q8WWG9 221 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 NCSTNQ92542 709 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 EPB41L1Q9H4G0 881 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 CASS4Q9NQ75 786 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 TRMT1Q9NXH9 659 aaKnown RBP18.38■□□□□ 0.53
HSPG2-210ENST00000481644 ZDHHC3Q9NYG2 299 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 WDR37Q9Y2I8 494 aa18.38■□□□□ 0.53
HSPG2-210ENST00000481644 TRBV5-4A0A0C4DH59 114 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 KLHL33A6NCF5 533 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 MGAT4DA6NG13 374 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 ATP1B2P14415 290 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-210ENST00000481644 MSNP26038 577 aaKnown RBP18.37■□□□□ 0.53
HSPG2-210ENST00000481644 ACRV1P26436 265 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 CACNG1Q06432 222 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 WDR74Q6RFH5 385 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-210ENST00000481644 SERPINA9Q86WD7 417 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 SPACA3Q8IXA5 215 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 RASGEF1CQ8N431 466 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 OR2L2Q8NH16 312 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 CCDC97Q96F63 343 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-210ENST00000481644 EIF2B3Q9NR50 452 aaKnown RBP18.37■□□□□ 0.53
HSPG2-210ENST00000481644 FAM8A1Q9UBU6 413 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 PSMD13Q9UNM6 376 aa18.37■□□□□ 0.53
HSPG2-210ENST00000481644 SGTAO43765 313 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 KIF5CO60282 957 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 PRSS56P0CW18 603 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 ADRA1DP25100 572 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 PSMA3P25788 255 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 SLC5A2P31639 672 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 ETV5P41161 510 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 PRLHRP49683 370 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 ARSDP51689 593 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 MAPK10P53779 464 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 SNAP47Q5SQN1 464 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 METRNLQ641Q3 311 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 RBM12BQ8IXT5 1001 aaKnown RBP18.36■□□□□ 0.53
HSPG2-210ENST00000481644 AGBL5Q8NDL9 886 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 MS4A14Q96JA4 679 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 PDLIM2Q96JY6 352 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 LINC00615Q96LM1 132 aaPredicted RBP18.36■□□□□ 0.53
HSPG2-210ENST00000481644 RANBP9Q96S59 729 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 SLC40A1Q9NP59 571 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 PCDHGA7Q9Y5G6 932 aa18.36■□□□□ 0.53
HSPG2-210ENST00000481644 IGLV3-16A0A075B6K0 115 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 PRAMEF33A0A0G2JMD5 474 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 OR51F1A6NGY5 319 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 UBXN7O94888 489 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 CSTF2P33240 577 aaKnown RBP eCLIP18.35■□□□□ 0.53
HSPG2-210ENST00000481644 GPR18Q14330 331 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 RPE65Q16518 533 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 TSTD2Q5T7W7 516 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 PIANPQ8IYJ0 282 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 PPHLN1Q8NEY8 458 aaKnown RBP18.35■□□□□ 0.53
HSPG2-210ENST00000481644 OR13J1Q8NGT2 312 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 NAP1L3Q99457 506 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-210ENST00000481644 AP1M1Q9BXS5 423 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 WWP1Q9H0M0 922 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 PDP2Q9P2J9 529 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 SLC2A6Q9UGQ3 507 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 ACSL5Q9ULC5 683 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 RIMKLBQ9ULI2 386 aa18.35■□□□□ 0.53
HSPG2-210ENST00000481644 TTC7AQ9ULT0 858 aaPredicted RBP18.35■□□□□ 0.53
HSPG2-210ENST00000481644 TCAF1Q9Y4C2 921 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms