RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KELP23276 732 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 TEAD1P28347 426 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 ELK3P41970 407 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 GNPDA1P46926 289 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 DUSP3P51452 185 aaPredicted RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 SRP54P61011 504 aaKnown RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 PRAMEP78395 509 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 RHDQ02161 417 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 PPARDQ03181 441 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 VAC14Q08AM6 782 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 PDIA2Q13087 525 aaKnown RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 CLN3Q13286 438 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 NFATC2Q13469 925 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 C1orf61Q13536 156 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 ITGA9Q13797 1035 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 FASTKD3Q14CZ7 662 aaKnown RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 HIF1AQ16665 826 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 ALG11Q2TAA5 492 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 ANKRD20A4Q4UJ75 823 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 KHDC1Q4VXA5 237 aaKnown RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 GLE1Q53GS7 698 aaKnown RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 GPRC6AQ5T6X5 926 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 ZDHHC20Q5W0Z9 365 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 ZDHHC24Q6UX98 284 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 DET1Q7L5Y6 550 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 NLRP9Q7RTR0 991 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 SNX20Q7Z614 316 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 LDB1Q86U70 411 aaPredicted RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 CCDC25Q86WR0 208 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 PHYKPLQ8IUZ5 450 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 PIANPQ8IYJ0 282 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 PHACTR4Q8IZ21 702 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 LSMEM2Q8N112 164 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 OTUD6BQ8N6M0 293 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 FBXO25Q8TCJ0 367 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 LMX1AQ8TE12 382 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 ART4Q93070 314 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 CCDC97Q96F63 343 aaPredicted RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 CFAP36Q96G28 342 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 PDXPQ96GD0 296 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 COX14Q96I36 57 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 LRRC61Q9BV99 259 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 DUSP23Q9BVJ7 150 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 KIFC1Q9BW19 673 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 DPH1Q9BZG8 443 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 OR2AG1Q9H205 316 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 FGF22Q9HCT0 170 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 SAYSD1Q9NPB0 183 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 TREX1Q9NSU2 369 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 NFKBIL1Q9UBC1 381 aaPredicted RBP8.94□□□□□ -0.98
VCP-206ENST00000480327 RABGEF1Q9UJ41 708 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 CHMP2BQ9UQN3 213 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 RPS6KL1Q9Y6S9 549 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 PTPN13Q12923 2485 aa8.94□□□□□ -0.98
VCP-206ENST00000480327 ZFC3H1O60293 1989 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 SDK2Q58EX2 2172 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 FAM237BA0A1B0GVD1 139 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 PRSS38A1L453 326 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 MAGEB16A2A368 324 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 H7C0S8 307 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 K7ENP7 123 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 SMAPO00193 183 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 NTN3O00634 580 aaPredicted RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 TPP1O14773 563 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 NDC80O14777 642 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 YY2O15391 372 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 TNFP01375 233 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 F7P08709 466 aaPredicted RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 HOXC4P09017 264 aaPredicted RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 ZNF8P17098 575 aaPredicted RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 AKT1P31749 480 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 UCNP55089 124 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 ACVR1Q04771 509 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 CACNG1Q06432 222 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 SRSF6Q13247 344 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 HLTFQ14527 1009 aaKnown RBP eCLIP8.93□□□□□ -0.98
VCP-206ENST00000480327 SEMA3AQ14563 771 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 PLA2G4EQ3MJ16 856 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 FASTKD1Q53R41 847 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 TAF1BQ53T94 588 aaPredicted RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 PDPK2PQ6A1A2 396 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 INO80CQ6PI98 192 aaPredicted RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 AFTPHQ6ULP2 937 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 CRTC3Q6UUV7 619 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 CAPN12Q6ZSI9 719 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 CENPUQ71F23 418 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 B3GNT8Q7Z7M8 397 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 ADGRG6Q86SQ4 1221 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 CLEC14AQ86T13 490 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 SERPINA9Q86WD7 417 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 ZBED8Q8IZ13 594 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 UNC5BQ8IZJ1 945 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 FBXO36Q8NEA4 188 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 OR4L1Q8NH43 312 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 TTC25Q96NG3 672 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 VPS35Q96QK1 796 aa8.93□□□□□ -0.98
VCP-206ENST00000480327 EBNA1BP2Q99848 306 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 WDR83Q9BRX9 315 aaKnown RBP8.93□□□□□ -0.98
VCP-206ENST00000480327 FRMD8Q9BZ67 464 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms