RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 IQCKQ8N0W5 287 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 CLDN19Q8N6F1 224 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 GABPB2Q8TAK5 448 aaPredicted RBP9.45□□□□□ -0.9
CD46-214ENST00000480003 SLC44A1Q8WWI5 657 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 CDKL2Q92772 493 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 DCUN1D1Q96GG9 259 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 ZNF514Q96K75 400 aaPredicted RBP9.45□□□□□ -0.9
CD46-214ENST00000480003 CPNE1Q99829 537 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 ZDHHC5Q9C0B5 715 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 TCEAL2Q9H3H9 227 aaPredicted RBP9.45□□□□□ -0.9
CD46-214ENST00000480003 CAAP1Q9H8G2 361 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 PPANQ9NQ55 473 aaKnown RBP9.45□□□□□ -0.9
CD46-214ENST00000480003 FBXO6Q9NRD1 293 aaPredicted RBP9.45□□□□□ -0.9
CD46-214ENST00000480003 NSMCE4AQ9NXX6 385 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 ZFATQ9P243 1243 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 SLC17A6Q9P2U8 582 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 GULP1Q9UBP9 304 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 KLQ9UEF7 1012 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 SLC23A2Q9UGH3 650 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 SUFUQ9UMX1 484 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 CRYL1Q9Y2S2 319 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 MED16Q9Y2X0 877 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 ST14Q9Y5Y6 855 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 NFS1Q9Y697 457 aa9.45□□□□□ -0.9
CD46-214ENST00000480003 PLXNB3Q9ULL4 1909 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 C17orf113A0A1B0GUU1 675 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 KHNYNO15037 678 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 PFDN6O15212 129 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 LRP3O75074 770 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 TCEA3O75764 348 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 POP7O75817 140 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 RASGRP1O95267 797 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 ESR1P03372 595 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 RALBP11234 206 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 PKMP14618 531 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 H2AFXP16104 143 aaPredicted RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 FMO4P31512 558 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 PRLHRP49683 370 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 CSE1LP55060 971 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 HLA-BQ31612 363 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 MAP9Q49MG5 647 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 ZNF542PQ5EBM4 170 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 CTSL3PQ5NE16 218 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 RNF187Q5TA31 235 aaPredicted RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 GRTP1Q5TC63 336 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 DOK6Q6PKX4 331 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 DBX2Q6ZNG2 339 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 ERMP1Q7Z2K6 904 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 STRA8Q7Z7C7 330 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 PARGQ86W56 976 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 ZC3HC1Q86WB0 502 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 NRROSQ86YC3 692 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 PPM1NQ8N819 430 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 UHMK1Q8TAS1 419 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 GPBAR1Q8TDU6 330 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 NAT14Q8WUY8 206 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 UBLCP1Q8WVY7 318 aaPredicted RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 PDXPQ96GD0 296 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 ELF4Q99607 663 aaPredicted RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 AARSD1Q9BTE6 412 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 DHRS4Q9BTZ2 278 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 NUSAP1Q9BXS6 441 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 ZCCHC2Q9C0B9 1178 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 SMOC1Q9H4F8 434 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 CYP4F12Q9HCS2 524 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 TRNAU1APQ9NX07 287 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 FETUBQ9UGM5 382 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 ZNHIT2Q9UHR6 403 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 VWA7Q9Y334 891 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 PLEKHM1Q9Y4G2 1056 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 PCDHB1Q9Y5F3 818 aa9.44□□□□□ -0.9
CD46-214ENST00000480003 ZNF106Q9H2Y7 1883 aaKnown RBP9.44□□□□□ -0.9
CD46-214ENST00000480003 OTOGLQ3ZCN5 2332 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 A0A1B0GTQ1 180 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 HMX2A2RU54 273 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 KLHL33A6NCF5 533 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 MGAT4DA6NG13 374 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 OR2AG2A6NM03 316 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 QSOX1O00391 747 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 KMOO15229 486 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 DFNA5O60443 496 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 ERLIN1O75477 346 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 GPC4O75487 556 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 FAM155BO75949 473 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 SHBGP04278 402 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 SYPP08247 313 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 GSTM1P09488 218 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 NUDT17P0C025 328 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 OR56A5P0C7T3 313 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 NME1P15531 152 aaKnown RBP9.43□□□□□ -0.9
CD46-214ENST00000480003 AKT1P31749 480 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 GP5P40197 560 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CD151P48509 253 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CSRP3P50461 194 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 BLKP51451 505 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 HNRNPKP61978 463 aaKnown RBP eCLIP9.43□□□□□ -0.99e-8■■■□□ 15.5
CD46-214ENST00000480003 ARHGAP8P85298 464 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 CTBSQ01459 385 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 GSTM4Q03013 218 aa9.43□□□□□ -0.9
CD46-214ENST00000480003 DMPKQ09013 629 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms