RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 IRF2BP2Q7Z5L9 587 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 OOSP2Q86WS3 158 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 RAB43Q86YS6 212 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 ZNF547Q8IVP9 402 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 DSELQ8IZU8 1212 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 CARFQ8N187 725 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 GPR26Q8NDV2 337 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 GPR150Q8NGU9 434 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 ZNF501Q96CX3 271 aaPredicted RBP15.74■□□□□ 0.11
DDX56-210ENST00000479440 SOHLH2Q9NX45 425 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 MYO1AQ9UBC5 1043 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 LIMA1Q9UHB6 759 aaKnown RBP15.74■□□□□ 0.11
DDX56-210ENST00000479440 MYO6Q9UM54 1294 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 ITPR2Q14571 2701 aa15.74■□□□□ 0.11
DDX56-210ENST00000479440 ABCA12Q86UK0 2595 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 OR5K3A6NET4 321 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 MEN1O00255 615 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 KCNJ13O60928 360 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 GZMAP12544 262 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 CD86P42081 329 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 PIGHQ14442 188 aaPredicted RBP15.73■□□□□ 0.11
DDX56-210ENST00000479440 KYNUQ16719 465 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 NCBP2-AS2Q69YL0 99 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 CERS6Q6ZMG9 384 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 TTC30BQ8N4P2 665 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 CISD2Q8N5K1 135 aaKnown RBP15.73■□□□□ 0.11
DDX56-210ENST00000479440 TM9SF4Q92544 642 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 MARVELD3Q96A59 401 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 CLIP3Q96DZ5 547 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 TSGA13Q96PP4 275 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 VPS35Q96QK1 796 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 FANCLQ9NW38 375 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 DTLQ9NZJ0 730 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 WDR37Q9Y2I8 494 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 PADI2Q9Y2J8 665 aa15.73■□□□□ 0.11
DDX56-210ENST00000479440 MX2P20592 715 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 SLC25A11Q02978 314 aaKnown RBP15.72■□□□□ 0.11
DDX56-210ENST00000479440 RAPSNQ13702 412 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 ATP1A4Q13733 1029 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 PAFAH1B3Q15102 231 aaKnown RBP15.72■□□□□ 0.11
DDX56-210ENST00000479440 ASIC2Q16515 512 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 PLEKHN1Q494U1 663 aaPredicted RBP15.72■□□□□ 0.11
DDX56-210ENST00000479440 PLEKHS1Q5SXH7 462 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 TXNRD3NBQ6F5E7 133 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 ARMC6Q6NXE6 501 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 FAM198BQ6UWH4 519 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 ZBTB2Q8N680 514 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 EID2BQ96D98 161 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 TTC25Q96NG3 672 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 GPR63Q9BZJ6 419 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 ZCCHC2Q9C0B9 1178 aaKnown RBP15.72■□□□□ 0.11
DDX56-210ENST00000479440 SHOC2Q9UQ13 582 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 ENTPD4Q9Y227 616 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 ZNF711Q9Y462 761 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 MED13Q9UHV7 2174 aa15.72■□□□□ 0.11
DDX56-210ENST00000479440 C9J4A7 227 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 IPO13O94829 963 aaKnown RBP15.71■□□□□ 0.11
DDX56-210ENST00000479440 RORAP35398 523 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 DMPKQ09013 629 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 MMRN1Q13201 1228 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 RPE65Q16518 533 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 CCDC183Q5T5S1 534 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 TMC3Q7Z5M5 1100 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 C11orf96Q7Z7L8 435 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 SYTL1Q8IYJ3 562 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 NIPA2Q8N8Q9 360 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 SLC38A9Q8NBW4 561 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 CLEC1AQ8NC01 280 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 ST6GALNAC3Q8NDV1 305 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 GDAP1Q8TB36 358 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 BRSK1Q8TDC3 778 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 HDAC11Q96DB2 347 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 FER1L6-AS2Q96M78 137 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 IP6K3Q96PC2 410 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 RANBP9Q96S59 729 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 XPO4Q9C0E2 1151 aaKnown RBP15.71■□□□□ 0.11
DDX56-210ENST00000479440 SLC7A5P2Q9GIP4 190 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 HAUS4Q9H6D7 363 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 MAGEE1Q9HCI5 957 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 AGPAT4Q9NRZ5 378 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 IMP3Q9NV31 184 aaKnown RBP15.71■□□□□ 0.11
DDX56-210ENST00000479440 HRASLS2Q9NWW9 162 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 BTRCQ9Y297 605 aa15.71■□□□□ 0.11
DDX56-210ENST00000479440 COPG1Q9Y678 874 aaKnown RBP15.71■□□□□ 0.11
DDX56-210ENST00000479440 RP1L1Q8IWN7 2480 aaPredicted RBP15.71■□□□□ 0.1
DDX56-210ENST00000479440 HIVEP3Q5T1R4 2406 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 ARHGAP10A1A4S6 786 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 LRRC53A6NM62 1247 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 F5H423 210 aaPredicted RBP15.7■□□□□ 0.1
DDX56-210ENST00000479440 IGHEP01854 428 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 MMP2P08253 660 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 MTHFD1P11586 935 aaKnown RBP15.7■□□□□ 0.1
DDX56-210ENST00000479440 BPIP17213 487 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 CYP2A7P20853 494 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 ADCY2Q08462 1091 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 TMEM115Q12893 351 aaPredicted RBP15.7■□□□□ 0.1
DDX56-210ENST00000479440 ABRQ12979 859 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 XRCC4Q13426 336 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 NCF4Q15080 339 aa15.7■□□□□ 0.1
DDX56-210ENST00000479440 HADHQ16836 314 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms