RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 INPP5JQ15735 1006 aaPredicted RBP9.45□□□□□ -0.9
CCM2-210ENST00000478169 CHRNA6Q15825 494 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 KHDC1Q4VXA5 237 aaKnown RBP9.45□□□□□ -0.9
CCM2-210ENST00000478169 IZUMO3Q5VZ72 239 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 CPZQ66K79 652 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 CRYBG3Q68DQ2 2970 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 CCDC70Q6NSX1 233 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 FAM199XQ6PEV8 388 aaPredicted RBP9.45□□□□□ -0.9
CCM2-210ENST00000478169 NT5DC3Q86UY8 548 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 TRAPPC5Q8IUR0 188 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 CARFQ8N187 725 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 D2HGDHQ8N465 521 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 DTX3LQ8TDB6 740 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 SYN2Q92777 582 aaPredicted RBP9.45□□□□□ -0.9
CCM2-210ENST00000478169 TTC25Q96NG3 672 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 LRFN5Q96NI6 719 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 RUFY1Q96T51 708 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 MAP3K3Q99759 626 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 BPIFA3Q9BQP9 254 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 TUBB2BQ9BVA1 445 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 SLC29A3Q9BZD2 475 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 SLC25A51Q9H1U9 297 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 KCND1Q9NSA2 647 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 TRIM10Q9UDY6 481 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 LCMT1Q9UIC8 334 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 G3BP2Q9UN86 482 aaKnown RBP9.45□□□□□ -0.9
CCM2-210ENST00000478169 WDR37Q9Y2I8 494 aa9.45□□□□□ -0.9
CCM2-210ENST00000478169 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
CCM2-210ENST00000478169 DIDO1Q9BTC0 2240 aaKnown RBP9.45□□□□□ -0.9
CCM2-210ENST00000478169 CELSR2Q9HCU4 2923 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 SSU72P8A0A1W2PR75 194 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 SCRG1O75711 98 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 PROSCO94903 275 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 SLC4A1P02730 911 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 SERPING1P05155 500 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 KLK3P07288 261 aaPredicted RBP9.44□□□□□ -0.9
CCM2-210ENST00000478169 RAB40ALP0C0E4 278 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 PIRTP0C851 137 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 HMGCLP35914 325 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 GSDMDP57764 484 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 TYRO3Q06418 890 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 CHAF1BQ13112 559 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 IL10RAQ13651 578 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 RPE65Q16518 533 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 ATP13A5Q4VNC0 1218 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 DNTTIP2Q5QJE6 756 aaKnown RBP9.44□□□□□ -0.9
CCM2-210ENST00000478169 TMTC4Q5T4D3 741 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 ZDHHC20Q5W0Z9 365 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 JMJD6Q6NYC1 403 aaPredicted RBP9.44□□□□□ -0.9
CCM2-210ENST00000478169 AMZ2Q86W34 360 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 TMEM126BQ8IUX1 230 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 RHOT1Q8IXI2 618 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 GDAP1Q8TB36 358 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 ADAMTS17Q8TE56 1095 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 ZFPM2Q8WW38 1151 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 MR1Q95460 341 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 TADA1Q96BN2 335 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 NAP1L5Q96NT1 182 aaPredicted RBP9.44□□□□□ -0.9
CCM2-210ENST00000478169 RNF157Q96PX1 679 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 ZCCHC2Q9C0B9 1178 aaKnown RBP9.44□□□□□ -0.9
CCM2-210ENST00000478169 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 LATS2Q9NRM7 1088 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCM2-210ENST00000478169 TMPRSS11EQ9UL52 423 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 POLEQ07864 2286 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 CNTRLQ7Z7A1 2325 aa9.44□□□□□ -0.9
CCM2-210ENST00000478169 A0A087X0T9 212 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 A0A1W2PQJ5 194 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 UBA6A0AVT1 1052 aaPredicted RBP9.43□□□□□ -0.9
CCM2-210ENST00000478169 OR5K3A6NET4 321 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 WIPF3A6NGB9 483 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 ZNF487B1APH4 448 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 TCP11X1B4DZS4 312 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 POP7O75817 140 aaKnown RBP9.43□□□□□ -0.9
CCM2-210ENST00000478169 TMEM63AO94886 807 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 ZBTB11O95625 1053 aaPredicted RBP9.43□□□□□ -0.9
CCM2-210ENST00000478169 NDST3O95803 873 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 FAM228BP0C875 321 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 KDELR1P24390 212 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 PTGIRP43119 386 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 TAS2R40P59535 323 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 AP1B1Q10567 949 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 GPS2Q13227 327 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 NR1I3Q14994 352 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 PLCL1Q15111 1095 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 PDK1Q15118 436 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 PCSK7Q16549 785 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 EIF2S3LQ2VIR3 472 aaKnown RBP9.43□□□□□ -0.9
CCM2-210ENST00000478169 LDLRAP1Q5SW96 308 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 ALKBH5Q6P6C2 394 aaKnown RBP9.43□□□□□ -0.9
CCM2-210ENST00000478169 CERS6Q6ZMG9 384 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 MAMDC2Q7Z304 686 aaPredicted RBP9.43□□□□□ -0.9
CCM2-210ENST00000478169 OOSP2Q86WS3 158 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 VSIG1Q86XK7 387 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 PLD5Q8N7P1 536 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 BEND7Q8N7W2 519 aaPredicted RBP9.43□□□□□ -0.9
CCM2-210ENST00000478169 TMEM102Q8N9M5 508 aaPredicted RBP9.43□□□□□ -0.9
CCM2-210ENST00000478169 Q8NA96 180 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 GPR150Q8NGU9 434 aa9.43□□□□□ -0.9
CCM2-210ENST00000478169 CPT1BQ92523 772 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms