RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 PTGDR2Q9Y5Y4 395 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 FAM234BA2RU67 622 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 NME4O00746 187 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 ARHGEF15O94989 841 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 MT-CO1P00395 513 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 S100BP04271 92 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-212ENST00000477970 ZNF26P17031 533 aaPredicted RBP12.05□□□□□ -0.48
PTPRF-212ENST00000477970 SPAM1P38567 509 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 AGTR2P50052 363 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 LMAN2Q12907 356 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 RBBP7Q16576 425 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 LRRC36Q1X8D7 754 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 PLEKHG6Q3KR16 790 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 RTL10Q7L3V2 364 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 LRRC58Q96CX6 371 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 ZNF597Q96LX8 424 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 SLC2A11Q9BYW1 496 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 C8orf4Q9NR00 106 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 ACTR3BQ9P1U1 418 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 SUFUQ9UMX1 484 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 HS3ST2Q9Y278 367 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 SH3BP1Q9Y3L3 701 aa12.05□□□□□ -0.48
PTPRF-212ENST00000477970 C15orf38-AP3S2A0A0A6YYH1 394 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 TRAV19A0A0A6YYK7 116 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 SERPINA4P29622 427 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 GPRC6AQ5T6X5 926 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 TPGS1Q6ZTW0 290 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 ARPINQ7Z6K5 226 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 CAMK1DQ8IU85 385 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 SLC15A3Q8IY34 581 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 AHI1Q8N157 1196 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 DPP10Q8N608 796 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 PACRGLQ8N7B6 248 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 OR2AP1Q8NGE2 309 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 MCCC1Q96RQ3 725 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 PCDHAC1Q9H158 963 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 IL26Q9NPH9 171 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 CCM2LQ9NUG4 571 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 EIF2B4Q9UI10 523 aaKnown RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 LEF1Q9UJU2 399 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 BTRCQ9Y297 605 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 WDR47O94967 919 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 OTCP00480 354 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 ALPIP09923 528 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 BMP2P12643 396 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 PCSK2P16519 638 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 SLC6A2P23975 617 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 GABRR2P28476 465 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 HNF1BP35680 557 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 EEFSECP57772 596 aaKnown RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 KCNK10P57789 538 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 ERVPABLB-1P60509 514 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 WDR5P61964 334 aaKnown RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 EMX2Q04743 252 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 TLR1Q15399 786 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 MAP7D1Q3KQU3 841 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 PTRHD1Q6GMV3 140 aaKnown RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 GOLGA7Q7Z5G4 137 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 PLPP6Q8IY26 295 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 MYO1HQ8N1T3 1032 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 ZNF557Q8N988 423 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 DDI1Q8WTU0 396 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 ATP6V1E2Q96A05 226 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 FAM126AQ9BYI3 521 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 ASIC5Q9NY37 505 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 PADI4Q9UM07 663 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 GLYATL1P3A0A0U1RQE8 302 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 ARNTLO00327 626 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 OR7A17O14581 309 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 FFAR2O15552 330 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 SMAD6O43541 496 aaKnown RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 SLC22A3O75751 556 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 FGF19O95750 216 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 BPIP17213 487 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 PAX7P23759 505 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 DDX6P26196 483 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 PRDX3P30048 256 aaKnown RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 MSX2P35548 267 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 RALGDSQ12967 914 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 RPS6KA2Q15349 733 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 SULT1C3Q6IMI6 304 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 FRA10AC1Q70Z53 315 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 FAM156AQ8NDB6 213 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 OR2T11Q8NH01 316 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 TMEM125Q96AQ2 219 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 ZNF696Q9H7X3 374 aa12.04□□□□□ -0.48
PTPRF-212ENST00000477970 EVLQ9UI08 416 aaPredicted RBP12.04□□□□□ -0.48
PTPRF-212ENST00000477970 C1orf232A0A0U1RR37 186 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 K7ERQ8 282 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 TGM5O43548 720 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 CTPS1P17812 591 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 SNRPD1P62314 119 aaKnown RBP12.03□□□□□ -0.48
PTPRF-212ENST00000477970 DEFB103AP81534 67 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 VPS26BQ4G0F5 336 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 C6orf136Q5SQH8 315 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 TPRG1Q6ZUI0 275 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 ZFAND4Q86XD8 727 aa12.03□□□□□ -0.48
PTPRF-212ENST00000477970 GCNAQ96QF7 691 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms