RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SCN8AQ9UQD0 1980 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 IGHV5-10-1A0A0J9YXX1 117 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CCDC78A2IDD5 438 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CCDC151A5D8V7 595 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 A8MU76 341 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 GPR89AB7ZAQ6 455 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 TMX2-CTNND1H3BSU7 103 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 NDC80O14777 642 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ZW10O43264 779 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 LDB2O43679 373 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 PPFIA2O75334 1257 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 POP7O75817 140 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ZNF189O75820 626 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 SRP72O76094 671 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 DXOO77932 396 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 PRAMEF1O95521 474 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CRTAMO95727 393 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 JMJD7P0C870 316 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ZSCAN5DPP0CG00 497 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 GPR89BP0CG08 455 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 PRSS56P0CW18 603 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 MSH3P20585 1137 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 TNFRSF8P28908 595 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 AKT1P31749 480 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 STIP1P31948 543 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CCKBRP32239 447 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CSF2RBP32927 897 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ETV5P41161 510 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ABCG1P45844 678 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 FASLGP48023 281 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 LMAN1P49257 510 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 MAPK10P53779 464 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 PCBP4P57723 403 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ERVPABLB-1P60509 514 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 XIAPP98170 497 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 GUCY2DQ02846 1103 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CUL1Q13616 776 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ITGA9Q13797 1035 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 POU6F1Q14863 301 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 C16orf72Q14CZ0 275 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 OASLQ15646 514 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 SNAP47Q5SQN1 464 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 LDLRAP1Q5SW96 308 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 FNBP1LQ5T0N5 605 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 KCTD11Q693B1 232 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 C11orf96Q7Z7L8 435 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 SLC9B2Q86UD5 537 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 SPACA3Q8IXA5 215 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 KLHDC8BQ8IXV7 354 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 EIF1ADQ8N9N8 165 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 GLIS1Q8NBF1 620 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ZNF248Q8NDW4 579 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 DDHD1Q8NEL9 900 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 OR52K1Q8NGK4 314 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ANKRD7Q92527 254 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 NCSTNQ92542 709 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 LRRC45Q96CN5 670 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 SGF29Q96ES7 293 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CCDC97Q96F63 343 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 AHCYL2Q96HN2 611 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 DNAJC1Q96KC8 554 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CCDC74BQ96LY2 380 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 PPP1R2P1Q96PQ5 205 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 TIMM29Q9BSF4 260 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 LRRC40Q9H9A6 602 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ETNK1Q9HBU6 452 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ARNT2Q9HBZ2 717 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 SARS2Q9NP81 518 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 FAM114A2Q9NRY5 505 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 THSD1Q9NS62 852 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 ZNF624Q9P2J8 865 aaPredicted RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CPNE7Q9UBL6 633 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 KLHL3Q9UH77 587 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 PSMD13Q9UNM6 376 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 DRG1Q9Y295 367 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 WDR37Q9Y2I8 494 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 NBEAQ8NFP9 2946 aa8.14□□□□□ -1.11
HDAC6-221ENST00000477561 URB1O60287 2271 aaKnown RBP8.14□□□□□ -1.11
HDAC6-221ENST00000477561 CHD6Q8TD26 2715 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 KIR2DS5A0A0G2JLQ3 304 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 A0A0G2JNG1 304 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 OR5K4A6NMS3 321 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 OR52A4PA6NMU1 304 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CDRT15L2A8MXV6 281 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 E7EVH7 732 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 KIR2DS3K7RE56 304 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 TTI1O43156 1089 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 KLK10O43240 276 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 PSMD3O43242 534 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 AP2A1O95782 977 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 VIPP01282 170 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 CCL4P13236 92 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 SLC2A4P14672 509 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 BRAFP15056 766 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 H2AFXP16104 143 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-221ENST00000477561 TYRP1P17643 537 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 IDSP22304 550 aa8.13□□□□□ -1.11
HDAC6-221ENST00000477561 SLC5A2P31639 672 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms