RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CACNA1GO43497 2377 aa20.78■□□□□ 0.92
LIME1-204ENST00000476183 CCDC78A2IDD5 438 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 MROH6A6NGR9 719 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 LILRA5A6NI73 299 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 ERI2A8K979 691 aaKnown RBP20.77■□□□□ 0.92
LIME1-204ENST00000476183 H7C0S8 307 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 HGSO14964 777 aaPredicted RBP20.77■□□□□ 0.92
LIME1-204ENST00000476183 KCNJ13O60928 360 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 VIPP01282 170 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 ITGALP20701 1170 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 PBLDP30039 288 aaPredicted RBP20.77■□□□□ 0.92
LIME1-204ENST00000476183 RPL22P35268 128 aaKnown RBP20.77■□□□□ 0.92
LIME1-204ENST00000476183 PPM1FP49593 454 aaPredicted RBP20.77■□□□□ 0.92
LIME1-204ENST00000476183 SEMA5AQ13591 1074 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 TRA2AQ13595 282 aaKnown RBP eCLIP20.77■□□□□ 0.92
LIME1-204ENST00000476183 KCTD19Q17RG1 926 aaPredicted RBP20.77■□□□□ 0.92
LIME1-204ENST00000476183 CCDC38Q502W7 563 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 WDR74Q6RFH5 385 aaPredicted RBP20.77■□□□□ 0.92
LIME1-204ENST00000476183 TMEM26Q6ZUK4 368 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 LINC00523Q86TU6 105 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 JAMLQ86YT9 394 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 CCDC89Q8N998 374 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 NCSTNQ92542 709 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 ULK4Q96C45 1275 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 CDKN2AIPNLQ96HQ2 116 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 KCNF1Q9H3M0 494 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 UCK1Q9HA47 277 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 RAB6BQ9NRW1 208 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 OGFRQ9NZT2 677 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 DRG1Q9Y295 367 aaKnown RBP20.77■□□□□ 0.92
LIME1-204ENST00000476183 SLC30A1Q9Y6M5 507 aa20.77■□□□□ 0.92
LIME1-204ENST00000476183 TRBV5-4A0A0C4DH59 114 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 C9orf172C9J069 976 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 PRAMEF10O60809 474 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 PSMA3P25788 255 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 KCNJ1P48048 391 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 ARSDP51689 593 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 MAPK10P53779 464 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 CDH17Q12864 832 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 BCL7AQ4VC05 210 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 TRIM48Q8IWZ4 208 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 REXO1L1PQ8IX06 675 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 STYXQ8WUJ0 223 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 USP7Q93009 1102 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 ZNF514Q96K75 400 aaPredicted RBP20.76■□□□□ 0.91
LIME1-204ENST00000476183 ZMYND15Q9H091 742 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 PRORYQ9H606 182 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 SLC40A1Q9NP59 571 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 POT1Q9NUX5 634 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 FOXJ2Q9P0K8 574 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 PAK5Q9P286 719 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 PSMD13Q9UNM6 376 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 ZKSCAN5Q9Y2L8 839 aa20.76■□□□□ 0.91
LIME1-204ENST00000476183 SMG1Q96Q15 3661 aaKnown RBP20.76■□□□□ 0.91
LIME1-204ENST00000476183 MGAT4DA6NG13 374 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 NVLO15381 856 aaKnown RBP20.75■□□□□ 0.91
LIME1-204ENST00000476183 KLK10O43240 276 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 FGF3P11487 239 aaPredicted RBP20.75■□□□□ 0.91
LIME1-204ENST00000476183 GPR33Q49SQ1 333 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 ZRANB3Q5FWF4 1079 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 SNAP47Q5SQN1 464 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 METRNLQ641Q3 311 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 PIANPQ8IYJ0 282 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 DNAAF3Q8N9W5 541 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 PMEPA1Q969W9 287 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 DCUN1D1Q96GG9 259 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 COPS8Q99627 209 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 DPH1Q9BZG8 443 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 CASS4Q9NQ75 786 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 AKAP7Q9P0M2 348 aaPredicted RBP20.75■□□□□ 0.91
LIME1-204ENST00000476183 ACSL6Q9UKU0 697 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 SSUH2Q9Y2M2 353 aa20.75■□□□□ 0.91
LIME1-204ENST00000476183 IGLV3-16A0A075B6K0 115 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 A8MU76 341 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 E7EVH7 732 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 TYRP1P17643 537 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 ACRV1P26436 265 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 LMAN1P49257 510 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 CLN3Q13286 438 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 GPR18Q14330 331 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 RPE65Q16518 533 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 PPP1R21Q6ZMI0 780 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 ARHGAP22Q7Z5H3 698 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 SERPINA9Q86WD7 417 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 LILRA3Q8N6C8 439 aaPredicted RBP20.74■□□□□ 0.91
LIME1-204ENST00000476183 PRELID2Q8N945 189 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 AGBL5Q8NDL9 886 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 GPR150Q8NGU9 434 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 OR2L2Q8NH16 312 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 MAIP1Q8WWC4 291 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 CXorf40BQ96DE9 158 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 LINC00615Q96LM1 132 aaPredicted RBP20.74■□□□□ 0.91
LIME1-204ENST00000476183 EPB41L1Q9H4G0 881 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 OCIAD1Q9NX40 245 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 ZDHHC3Q9NYG2 299 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 FAM8A1Q9UBU6 413 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 PIKFYVEQ9Y2I7 2098 aa20.74■□□□□ 0.91
LIME1-204ENST00000476183 OR51F1A6NGY5 319 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 APRTP07741 180 aa20.73■□□□□ 0.91
LIME1-204ENST00000476183 ATP1B2P14415 290 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms