RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 WDR41Q9HAD4 459 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 SEMA4BQ9NPR2 832 aaPredicted RBP21.45■■□□□ 1.02
CCM2-206ENST00000474617 THG1LQ9NWX6 298 aaKnown RBP21.45■■□□□ 1.02
CCM2-206ENST00000474617 PTBP2Q9UKA9 531 aaKnown RBP21.45■■□□□ 1.02
CCM2-206ENST00000474617 LRRC42Q9Y546 428 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 DYTNA2CJ06 578 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 BNIP3LO60238 219 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 TRIM16O95361 564 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 PRNPP04156 253 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 C8GP07360 202 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 CA3P07451 260 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 PRR35P0CG20 571 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 MPC1LP0DKB6 136 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 UGT1A6P19224 532 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 UGT1A1P22309 533 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 UGT1A4P22310 534 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 UGT1A3P35503 534 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 UGT1A5P35504 534 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 SMU1Q2TAY7 513 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 MMEL1Q495T6 779 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 XKR7Q5GH72 579 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 TMEM215Q68D42 235 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 PRMT9Q6P2P2 845 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 DDIASQ8IXT1 998 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 CHST14Q8NCH0 376 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 SMARCD2Q92925 531 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 PPP2R3CQ969Q6 453 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 RSRC1Q96IZ7 334 aaKnown RBP21.45■■□□□ 1.02
CCM2-206ENST00000474617 MAGEB10Q96LZ2 347 aaPredicted RBP21.45■■□□□ 1.02
CCM2-206ENST00000474617 NSUN5Q96P11 429 aaKnown RBP21.45■■□□□ 1.02
CCM2-206ENST00000474617 TRIM54Q9BYV2 358 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 VCX3BQ9H321 246 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 FAM83DQ9H4H8 585 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 POMPQ9Y244 141 aa21.45■■□□□ 1.02
CCM2-206ENST00000474617 IQCF5A8MTL0 148 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 H0Y858 1186 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 LEFTY1O75610 366 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 KRT36O76013 467 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 ARHGEF15O94989 841 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 SYN1P17600 705 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 ATP13A5Q4VNC0 1218 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 AGKQ53H12 422 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 RPS27LQ71UM5 84 aaKnown RBP21.44■■□□□ 1.02
CCM2-206ENST00000474617 PHYKPLQ8IUZ5 450 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 DLG3Q92796 817 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 TUBGCP3Q96CW5 907 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 CLPTM1LQ96KA5 538 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 SDR39U1Q9NRG7 319 aaPredicted RBP21.44■■□□□ 1.02
CCM2-206ENST00000474617 G3BP2Q9UN86 482 aaKnown RBP21.44■■□□□ 1.02
CCM2-206ENST00000474617 NDUFAF1Q9Y375 327 aa21.44■■□□□ 1.02
CCM2-206ENST00000474617 PABPN1LA6NDY0 278 aaKnown RBP21.43■■□□□ 1.02
CCM2-206ENST00000474617 H0Y3Z8 333 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 NUAK1O60285 661 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 CSPG5O95196 566 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 GBX1Q14549 363 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 PIGGQ5H8A4 983 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 LDLRAP1Q5SW96 308 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 ZFP1Q6P2D0 407 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 SYVN1Q86TM6 617 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 ETFBKMTQ8IXQ9 262 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 ITFG1Q8TB96 612 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 ING5Q8WYH8 240 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 VPS35Q96QK1 796 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 ELOVL2Q9NXB9 296 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 POLG2Q9UHN1 485 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 PRSS21Q9Y6M0 314 aa21.43■■□□□ 1.02
CCM2-206ENST00000474617 A0A0U1RQS6 177 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 NCF1BA6NI72 391 aaPredicted RBP21.42■■□□□ 1.02
CCM2-206ENST00000474617 NCF1CA8MVU1 366 aaPredicted RBP21.42■■□□□ 1.02
CCM2-206ENST00000474617 GPR39O43194 453 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 NRP2O60462 931 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 KATNA1O75449 491 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 WDR47O94967 919 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 FTH1P02794 183 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 ATP1B2P14415 290 aaPredicted RBP21.42■■□□□ 1.02
CCM2-206ENST00000474617 NCF1P14598 390 aaPredicted RBP21.42■■□□□ 1.02
CCM2-206ENST00000474617 TSPAN8P19075 237 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 GPX3P22352 226 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 ME2P23368 584 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 HNMTP50135 292 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 GTF2H2Q13888 395 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 ZNF284Q2VY69 593 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 GTF2H2CQ6P1K8 395 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 CLDN19Q8N6F1 224 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 DDHD1Q8NEL9 900 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 TMIEQ8NEW7 156 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 ASB16Q96NS5 453 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 FAM83CQ9BQN1 747 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 MCOLN1Q9GZU1 580 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 S100A14Q9HCY8 104 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 CACNA2D2Q9NY47 1150 aa21.42■■□□□ 1.02
CCM2-206ENST00000474617 EIF2B4Q9UI10 523 aaKnown RBP21.42■■□□□ 1.02
CCM2-206ENST00000474617 DOCK6Q96HP0 2047 aa21.41■■□□□ 1.02
CCM2-206ENST00000474617 EDDM13A0A1B0GTR0 161 aa21.41■■□□□ 1.02
CCM2-206ENST00000474617 GRXCR2A6NFK2 248 aa21.41■■□□□ 1.02
CCM2-206ENST00000474617 LRRC14BA6NHZ5 514 aa21.41■■□□□ 1.02
CCM2-206ENST00000474617 TTC34A8MYJ7 566 aa21.41■■□□□ 1.02
CCM2-206ENST00000474617 PER2O15055 1255 aa21.41■■□□□ 1.02
CCM2-206ENST00000474617 TBX10O75333 385 aa21.41■■□□□ 1.02
CCM2-206ENST00000474617 ANXA5P08758 320 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms