RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CLCA4Q14CN2 919 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 CCNG2Q16589 344 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 GPR33Q49SQ1 333 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 SOWAHCQ53LP3 525 aaPredicted RBP10.98□□□□□ -0.65
CKS1B-206ENST00000474215 SNAP47Q5SQN1 464 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 METRNLQ641Q3 311 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 FAM83HQ6ZRV2 1179 aaPredicted RBP10.98□□□□□ -0.65
CKS1B-206ENST00000474215 DET1Q7L5Y6 550 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 ARHGAP22Q7Z5H3 698 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 SNX20Q7Z614 316 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 PLXDC1Q8IUK5 500 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 RBM12BQ8IXT5 1001 aaKnown RBP10.98□□□□□ -0.65
CKS1B-206ENST00000474215 NXPE1Q8N323 547 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 TRIM58Q8NG06 486 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 HEXDCQ8WVB3 486 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 CXorf40BQ96DE9 158 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 DCUN1D1Q96GG9 259 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 FAM96AQ9H5X1 160 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 POT1Q9NUX5 634 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 NLE1Q9NVX2 485 aaPredicted RBP10.98□□□□□ -0.65
CKS1B-206ENST00000474215 CRLS1Q9UJA2 301 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 WDR37Q9Y2I8 494 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 PCDHGA3Q9Y5H0 932 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 SLC30A1Q9Y6M5 507 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 TEX51A0A1B0GUA7 166 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 CCL22O00626 93 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 UBXN7O94888 489 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 IFNB1P01574 187 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 LIPCP11150 499 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 RALBP11234 206 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 TYRP1P17643 537 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 AMD1P17707 334 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 ITGALP20701 1170 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 MC4RP32245 332 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 FDFT1P37268 417 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 VAC14Q08AM6 782 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 GPR18Q14330 331 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 NFE2L1Q14494 772 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 POU6F1Q14863 301 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 TGIF1Q15583 401 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 BCL7AQ4VC05 210 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 ARHGAP40Q5TG30 622 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 CCDC81Q6ZN84 652 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 ZFAND4Q86XD8 727 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 BEND7Q8N7W2 519 aaPredicted RBP10.97□□□□□ -0.65
CKS1B-206ENST00000474215 OR2L2Q8NH16 312 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 ART4Q93070 314 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 DNAJC1Q96KC8 554 aaKnown RBP10.97□□□□□ -0.65
CKS1B-206ENST00000474215 CCNL2Q96S94 520 aaPredicted RBP10.97□□□□□ -0.65
CKS1B-206ENST00000474215 COPS8Q99627 209 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 TLR10Q9BXR5 811 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 ASPSCR1Q9BZE9 553 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 ETNK1Q9HBU6 452 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 PIH1D1Q9NWS0 290 aaKnown RBP10.97□□□□□ -0.65
CKS1B-206ENST00000474215 OCIAD1Q9NX40 245 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 SLC39A1Q9NY26 324 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 OGFRQ9NZT2 677 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 FOXJ2Q9P0K8 574 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 ACSL5Q9ULC5 683 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 PSMD13Q9UNM6 376 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 DRG1Q9Y295 367 aaKnown RBP10.97□□□□□ -0.65
CKS1B-206ENST00000474215 PPP2R2CQ9Y2T4 447 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 PCDHB11Q9Y5F2 797 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 SCN8AQ9UQD0 1980 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 KIF26BQ2KJY2 2108 aa10.97□□□□□ -0.65
CKS1B-206ENST00000474215 LOC400499M0QZD8 3231 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 TRBV5-4A0A0C4DH59 114 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 MROH6A6NGR9 719 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 EFCAB7A8K855 629 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 B4E171 279 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 CFAP99D6REC4 459 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 E7EVH7 732 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 H7C0S8 307 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 EFSO43281 561 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 SGTAO43765 313 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 SUN1O94901 812 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 GAS8O95995 478 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 ATP1B2P14415 290 aaPredicted RBP10.96□□□□□ -0.65
CKS1B-206ENST00000474215 ETS1P14921 441 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 PSMA3P25788 255 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 CD82P27701 267 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 PBLDP30039 288 aaPredicted RBP10.96□□□□□ -0.65
CKS1B-206ENST00000474215 TSPAN7P41732 249 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 LMAN1P49257 510 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 CDKN1CP49918 316 aaPredicted RBP10.96□□□□□ -0.65
CKS1B-206ENST00000474215 MC2RQ01718 297 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 CDH17Q12864 832 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 SEPT6Q14141 434 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 SIX1Q15475 284 aaPredicted RBP10.96□□□□□ -0.65
CKS1B-206ENST00000474215 RPE65Q16518 533 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 SKIDA1Q1XH10 827 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 ZRANB3Q5FWF4 1079 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 DCAF12Q5T6F0 453 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 DRICH1Q6PGQ1 229 aaPredicted RBP10.96□□□□□ -0.65
CKS1B-206ENST00000474215 TAS2R42Q7RTR8 314 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 FAM129CQ86XR2 697 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 DTX1Q86Y01 620 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 BMPERQ8N8U9 685 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 CCDC89Q8N998 374 aa10.96□□□□□ -0.65
CKS1B-206ENST00000474215 DNAAF3Q8N9W5 541 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms