RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 SLC22A2O15244 555 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 FFAR2O15552 330 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 XYLBO75191 536 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 CHEK2O96017 543 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 RPS17P08708 135 aaKnown RBP4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 CEBPBP17676 345 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 LBPP18428 481 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 LHCGRP22888 699 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 XPAP23025 273 aaPredicted RBP4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 ME2P23368 584 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 DGKAP23743 735 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 AKT1P31749 480 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 SOX11P35716 441 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 NNMTP40261 264 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 CASP2P42575 452 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 CSNK1DP48730 415 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 PIK3CGP48736 1102 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 CCNG1P51959 295 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 DIO3P55073 304 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 INHBCP55103 352 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 PSME3P61289 254 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 MRPS22P82650 360 aaKnown RBP4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 MS4A2Q01362 244 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 HSPA14Q0VDF9 509 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 RALGDSQ12967 914 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 ARHGEF7Q14155 803 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 MAPRE2Q15555 327 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 VPS26BQ4G0F5 336 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 KANK2Q63ZY3 851 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 REP15Q6BDI9 236 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 TLDC1Q6P9B6 456 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 TXNDC11Q6PKC3 985 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 GDPD4Q6W3E5 623 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 SPATA24Q86W54 205 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 NXPE1Q8N323 547 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 BHLHE22Q8NFJ8 381 aaPredicted RBP4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 ITFG1Q8TB96 612 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 METTL6Q8TCB7 284 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 SCAMP4Q969E2 229 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 ZFYVE19Q96K21 471 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 SPATA16Q9BXB7 569 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 FAM126AQ9BYI3 521 aaPredicted RBP4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 PCDHAC1Q9H158 963 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 NSUN3Q9H649 340 aaKnown RBP4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 B4GALT6Q9UBX8 382 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 POLG2Q9UHN1 485 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 ZNF225Q9UK10 706 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 PRPF19Q9UMS4 504 aaKnown RBP4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 HS3ST2Q9Y278 367 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 ANGPTL3Q9Y5C1 460 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 IRAK3Q9Y616 596 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 NUMA1Q14980 2115 aa4.8□□□□□ -1.64
TM4SF1-202ENST00000472441 E2F3O00716 465 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 STX16O14662 325 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 RAD51BO15315 384 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 NRP2O60462 931 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 LEFTY1O75610 366 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ESRRBO95718 433 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 MLYCDO95822 493 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 VIPR2P41587 438 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ADARP55265 1226 aaKnown RBP4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ERVPABLB-1P60509 514 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 CAMK1Q14012 370 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 HERC3Q15034 1050 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 PHKG1Q16816 387 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ZNF423Q2M1K9 1284 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 SGO1Q5FBB7 561 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 PIGGQ5H8A4 983 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ZNF648Q5T619 568 aaPredicted RBP4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ELMSAN1Q6PJG2 1045 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 IL27RAQ6UWB1 636 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 IZUMO2Q6UXV1 221 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 MBOAT1Q6ZNC8 495 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 GPRIN3Q6ZVF9 776 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ADIPOR2Q86V24 386 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 FUNDC1Q8IVP5 155 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 MIER2Q8N344 545 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ZBTB2Q8N680 514 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 OR2A12Q8NGT7 310 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 MTFMTQ96DP5 389 aaKnown RBP4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 LRCH3Q96II8 777 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 LMLNQ96KR4 655 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 COPS8Q99627 209 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 IPPKQ9H8X2 491 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 CACNA2D2Q9NY47 1150 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 WWOXQ9NZC7 414 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 TBC1D14Q9P2M4 693 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ERVW-1Q9UQF0 538 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 PIKFYVEQ9Y2I7 2098 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 GBF1Q92538 1859 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 FFAR3O14843 346 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 GPR42O15529 346 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 CAPN1P07384 714 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 UROSP10746 265 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 ATP6V1C1P21283 382 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 GPX3P22352 226 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 DDX6P26196 483 aaKnown RBP eCLIP4.79□□□□□ -1.642e-17■■■□□ 15.2
TM4SF1-202ENST00000472441 POLR2LP62875 67 aaKnown RBP4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 GTF2H2Q13888 395 aa4.79□□□□□ -1.64
TM4SF1-202ENST00000472441 BOP1Q14137 746 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms