RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 CD82P27701 267 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 PCSK6P29122 969 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 VIPR1P32241 457 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 SLC8A1P32418 973 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 KRT9P35527 623 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 PSMC2P35998 433 aaKnown RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 BCL6P41182 706 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 PSMD8P48556 350 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 SERPINB8P50452 374 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 C21orf58P58505 322 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 NOP14P78316 857 aaKnown RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 S100A12P80511 92 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 MRPS25P82663 173 aaKnown RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 PDE1BQ01064 536 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CD83Q01151 205 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CDK18Q07002 472 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 ZFP36L1Q07352 338 aaKnown RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 NIPAL4Q0D2K0 466 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 BNIP1Q12981 228 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CHAF1BQ13112 559 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CBX3Q13185 183 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 SNX1Q13596 522 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CCDC40Q4G0X9 1142 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 PHF19Q5T6S3 580 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 TBC1D3GQ6DHY5 549 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 TBC1D3CQ6IPX1 549 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 JMJD6Q6NYC1 403 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 C11orf88Q6PI97 169 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CNSTQ6PJW8 725 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 MOXD1Q6UVY6 613 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 RPTNQ6XPR3 784 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 RHOUQ7L0Q8 258 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 TBC1D3Q8IZP1 549 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 RBFAQ8N0V3 343 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 DAW1Q8N136 415 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CISD2Q8N5K1 135 aaKnown RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 Q8N9G6 341 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 KYQ8NBH2 561 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 OR8K3Q8NH51 312 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 LMX1AQ8TE12 382 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CCDC12Q8WUD4 166 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 ATL1Q8WXF7 558 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 STARD8Q92502 1023 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 SEC14L1Q92503 715 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 DHX58Q96C10 678 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 SNRNP40Q96DI7 357 aaKnown RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 C1orf159Q96HA4 380 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 IFT74Q96LB3 600 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 PPM1MQ96MI6 270 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 RPRD1AQ96P16 312 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 OMDQ99983 421 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 ACBD6Q9BR61 282 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 AIFM2Q9BRQ8 373 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 BOCQ9BWV1 1114 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 SGPP1Q9BX95 441 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 EHD1Q9H4M9 534 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 DENND2DQ9H6A0 471 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 NLRC4Q9NPP4 1024 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 TBCCD1Q9NVR7 557 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 KLHL14Q9P2G3 628 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 RCOR3Q9P2K3 495 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 TMEFF2Q9UIK5 374 aaPredicted RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 PADI4Q9UM07 663 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 OSGIN2Q9Y236 505 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 CHTOPQ9Y3Y2 248 aaKnown RBP4.39□□□□□ -1.71
LMNB1-205ENST00000472034 NME7Q9Y5B8 376 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 NPFFR2Q9Y5X5 522 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 B3GALT1Q9Y5Z6 326 aa4.39□□□□□ -1.71
LMNB1-205ENST00000472034 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 MDC1Q14676 2089 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 LOC100653049A0A140TA62 436 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 GOLGA6L7A0A1B0GV03 622 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ZC3H12DA2A288 527 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ARHGEF35A5YM69 484 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ZSCAN5CA6NGD5 496 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 LRRIQ3A6PVS8 624 aaPredicted RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PRAMEF26H0Y7S4 382 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 AP3B1O00203 1094 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PSMD9O00233 223 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 KRIT1O00522 736 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 KMOO15229 486 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 SLC16A4O15374 487 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 AQP9O43315 295 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 PRPF3O43395 683 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 XPOTO43592 962 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 CCNT1O60563 726 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 TLR5O60602 858 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 TOM1L1O75674 476 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 KRT34O76011 436 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 POP4O95707 220 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 TSPAN15O95858 294 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 AGR2O95994 175 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 FAM153BP0C7A2 387 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 MTHFD1P11586 935 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 EZRP15311 586 aaKnown RBP4.38□□□□□ -1.71
LMNB1-205ENST00000472034 GOT1P17174 413 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 TCN2P20062 427 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 ANXA13P27216 316 aa4.38□□□□□ -1.71
LMNB1-205ENST00000472034 HTR1EP28566 365 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms