RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 LUZP4Q9P127 313 aa4.17□□□□□ -1.74
CD46-213ENST00000471987 RCC2Q9P258 522 aaKnown RBP4.17□□□□□ -1.74
CD46-213ENST00000471987 EXOGQ9Y2C4 368 aaKnown RBP4.17□□□□□ -1.74
CD46-213ENST00000471987 NPIPB15A6NHN6 443 aaPredicted RBP4.16□□□□□ -1.74
CD46-213ENST00000471987 TGFB1I1O43294 461 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 ZBTB43O43298 467 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 NDUFS3O75489 264 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 HMBSP08397 361 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 ANXA7P20073 488 aaKnown RBP4.16□□□□□ -1.74
CD46-213ENST00000471987 HRH2P25021 359 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 CD81P60033 236 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 TFAP4Q01664 338 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 LRMPQ12912 555 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 NAB2Q15742 525 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 GTDC1Q4AE62 458 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 ACAD10Q6JQN1 1059 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 PLD3Q8IV08 490 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 TMEM116Q8NCL8 245 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 FAM222BQ8WU58 562 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 MTMR10Q9NXD2 777 aa4.16□□□□□ -1.74
CD46-213ENST00000471987 KLHL8Q9P2G9 620 aaPredicted RBP4.16□□□□□ -1.74
CD46-213ENST00000471987 R3HDM2Q9Y2K5 976 aaKnown RBP4.16□□□□□ -1.74
CD46-213ENST00000471987 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 A0A1W2PQF6 199 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 PRR32B1ATL7 298 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 HCRTR2O43614 444 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 PYGLP06737 847 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 EPHA2P29317 976 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 WNT5AP41221 380 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 TUBP50607 506 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 PPARDQ03181 441 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 GOLGA8DPQ0D2H9 430 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 MFAP5Q13361 173 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 MVPQ14764 893 aaKnown RBP4.15□□□□□ -1.75
CD46-213ENST00000471987 LRIF1Q5T3J3 769 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 SPINK14Q6IE38 97 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 TSPYL6Q8N831 410 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 ANKRD52Q8NB46 1076 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 OR8K5Q8NH50 307 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 UBE2Q2Q8WVN8 375 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 TMEM143Q96AN5 459 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 GIMAP5Q96F15 307 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 SLC47A1Q96FL8 570 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 RTP3Q9BQQ7 232 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 CABLES2Q9BTV7 478 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 CHMP4AQ9BY43 222 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 AGXT2Q9BYV1 514 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 ZNF71Q9NQZ8 489 aaPredicted RBP4.15□□□□□ -1.75
CD46-213ENST00000471987 TMEM181Q9P2C4 612 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 RABGAP1Q9Y3P9 1069 aa4.15□□□□□ -1.75
CD46-213ENST00000471987 TEX13DA0A0J9YY54 714 aaPredicted RBP4.14□□□□□ -1.75
CD46-213ENST00000471987 PLK4O00444 970 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 PLPP2O43688 288 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 SPARCP09486 303 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 SNRPD1P62314 119 aaKnown RBP4.14□□□□□ -1.75
CD46-213ENST00000471987 CEBPZQ03701 1054 aaKnown RBP4.14□□□□□ -1.75
CD46-213ENST00000471987 BHLHB9Q6PI77 547 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 TRIM65Q6PJ69 517 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 HEATR4Q86WZ0 1026 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 GPALPP1Q8IXQ4 340 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 HACE1Q8IYU2 909 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 CPXCR1Q8N123 301 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 NGEFQ8N5V2 710 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 ZNF611Q8N823 705 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 ZNF614Q8N883 585 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 ZUFSPQ96AP4 578 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 SYT11Q9BT88 431 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 SAGE1Q9NXZ1 904 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 B3GALT5Q9Y2C3 310 aa4.14□□□□□ -1.75
CD46-213ENST00000471987 OR2M5A3KFT3 312 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 H3BQ06 376 aaPredicted RBP4.13□□□□□ -1.75
CD46-213ENST00000471987 SMAD9O15198 467 aaKnown RBP4.13□□□□□ -1.75
CD46-213ENST00000471987 ZNF217O75362 1048 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 EDN1P05305 212 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 CKMT2P17540 419 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 PBX3P40426 434 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 ARHGEF16Q5VV41 709 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 PWWP2BQ6NUJ5 590 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 TPRG1Q6ZUI0 275 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 TSPAN33Q86UF1 283 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 P2RY8Q86VZ1 359 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 SCML4Q8N228 414 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 RRP36Q96EU6 259 aaKnown RBP4.13□□□□□ -1.75
CD46-213ENST00000471987 IWS1Q96ST2 819 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 GFI1Q99684 422 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 SEMA6AQ9H2E6 1030 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 PDCL3Q9H2J4 239 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 PLCXD1Q9NUJ7 323 aa4.13□□□□□ -1.75
CD46-213ENST00000471987 DBNLQ9UJU6 430 aaKnown RBP4.13□□□□□ -1.75
CD46-213ENST00000471987 COL5A2P05997 1499 aaPredicted RBP4.12□□□□□ -1.75
CD46-213ENST00000471987 A0A087WW49 117 aa4.12□□□□□ -1.75
CD46-213ENST00000471987 E9PQ18 207 aa4.12□□□□□ -1.75
CD46-213ENST00000471987 TMCC2O75069 709 aa4.12□□□□□ -1.75
CD46-213ENST00000471987 TRMUO75648 421 aaKnown RBP4.12□□□□□ -1.75
CD46-213ENST00000471987 ZFAND5O76080 213 aa4.12□□□□□ -1.75
CD46-213ENST00000471987 NGFP01138 241 aa4.12□□□□□ -1.75
CD46-213ENST00000471987 HIST1H2ABP04908 130 aa4.12□□□□□ -1.75
CD46-213ENST00000471987 TPOP07202 933 aa4.12□□□□□ -1.75
CD46-213ENST00000471987 CEBPBP17676 345 aa4.12□□□□□ -1.75
CD46-213ENST00000471987 HIST1H2ADP20671 130 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms