RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 RC3H2Q9HBD1 1191 aaKnown RBP8.49□□□□□ -1.05
CD47-204ENST00000471694 SEC14L3Q9UDX4 400 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 PCYOX1Q9UHG3 505 aa8.49□□□□□ -1.05
CD47-204ENST00000471694 TMX2-CTNND1H3BSU7 103 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 DNALI1O14645 258 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 DDX3YO15523 660 aaKnown RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 TBX1O43435 398 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 FASP25445 335 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 BMT2Q1RMZ1 405 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ZNF542PQ5EBM4 170 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 LY6G5CQ5SRR4 150 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 TRAF7Q6Q0C0 670 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 GALNTL5Q7Z4T8 443 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 OFCC1Q8IZS5 231 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 BOLLQ8N9W6 283 aaKnown RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 TM9SF4Q92544 642 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 FAM192AQ9GZU8 254 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MAP4K5Q9Y4K4 846 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 CDC7O00311 574 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 KMOO15229 486 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MFN2O95140 757 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 CD44P16070 742 aaKnown RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 TOB1P50616 345 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 NDST2P52849 883 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 FRG1Q14331 258 aaKnown RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 SF3B4Q15427 424 aaKnown RBP eCLIP8.48□□□□□ -1.053e-15■■■□□ 14.7
CD47-204ENST00000471694 TCHHL1Q5QJ38 904 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 TAC4Q86UU9 113 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 RANBP3LQ86VV4 465 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 IGSF21Q96ID5 467 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ZNF514Q96K75 400 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 MARK4Q96L34 752 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 INPP4AQ96PE3 977 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 CSPG4P5Q96PW8 444 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 ELOA3DA6NLF2 546 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 ARHGEF33A8MVX0 844 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 CHADO15335 359 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 IL6P05231 212 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ALOX5P09917 674 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 PKMP14618 531 aaKnown RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 POLR2CP19387 275 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 HSD11B1P28845 292 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 HSPA13P48723 471 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 PLP2Q04941 152 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ZMYND11Q15326 602 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 HKDC1Q2TB90 917 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ELOA3BQ3SY89 546 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 RNF19BQ6ZMZ0 732 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 TMCO2Q7Z6W1 182 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 MTDHQ86UE4 582 aaKnown RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 NLGN4XQ8N0W4 816 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ELOA3Q8NG57 546 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 CERS2Q96G23 380 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 SUSD3Q96L08 255 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 C1orf50Q9BV19 199 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 CPEB1Q9BZB8 566 aaKnown RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 TIGARQ9NQ88 270 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MED1Q15648 1581 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 TSC22D2O75157 780 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 PRKAR1AP10644 381 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 RAB14P61106 215 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 PCDH1Q08174 1060 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 BNIP1Q12981 228 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 SEMA5AQ13591 1074 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MYBPC3Q14896 1274 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ZBTB6Q15916 424 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 DHFR2Q86XF0 187 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ARL14Q8N4G2 192 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ZNF276Q8N554 614 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 ANKLE1Q8NAG6 615 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 TTLQ8NG68 377 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 CLHC1Q8NHS4 586 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MAGEE2Q8TD90 523 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 CASKIN2Q8WXE0 1202 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MMABQ96EY8 250 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 OR52E6Q96RD3 313 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 PNPLA8Q9NP80 782 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 TRIM24O15164 1050 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MYL9P24844 172 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 GRIA2P42262 883 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 RGS8P57771 180 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 RASGEF1BQ0VAM2 473 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 C1orf189Q5VU69 101 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 C1orf94Q6P1W5 598 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 THAP3Q8WTV1 239 aaPredicted RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 PDCD10Q9BUL8 212 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 CCSER2Q9H7U1 834 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 MIOSQ9NXC5 875 aa8.48□□□□□ -1.05
CD47-204ENST00000471694 CNOT6Q9ULM6 557 aaKnown RBP8.48□□□□□ -1.05
CD47-204ENST00000471694 A0A0G2JN53 185 aa8.47□□□□□ -1.05
CD47-204ENST00000471694 SERPINA3P01011 423 aa8.47□□□□□ -1.05
CD47-204ENST00000471694 MDH1P40925 334 aaKnown RBP8.47□□□□□ -1.05
CD47-204ENST00000471694 SLC9B1Q4ZJI4 515 aa8.47□□□□□ -1.05
CD47-204ENST00000471694 INO80DQ53TQ3 878 aaPredicted RBP8.47□□□□□ -1.05
CD47-204ENST00000471694 TOR1AIP1Q5JTV8 583 aa8.47□□□□□ -1.05
CD47-204ENST00000471694 SCAMP5Q8TAC9 235 aa8.47□□□□□ -1.05
CD47-204ENST00000471694 SNIP1Q8TAD8 396 aaKnown RBP8.47□□□□□ -1.05
CD47-204ENST00000471694 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
CD47-204ENST00000471694 C17orf62Q9BQA9 187 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms