RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 LIPCP11150 499 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 CTPS1P17812 591 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 WT1P19544 449 aaPredicted RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 MGAT1P26572 445 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 TNNT3P45378 269 aaPredicted RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 GPR3P46089 330 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 CRADDP78560 199 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 SARNPP82979 210 aaKnown RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 CDK16Q00536 496 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 ARHGEF7Q14155 803 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 C16orf72Q14CZ0 275 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 CLPPQ16740 277 aaPredicted RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 PYCR3Q53H96 274 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 SIRPB2Q5JXA9 342 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 ARMC12Q5T9G4 340 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 LRRC66Q68CR7 880 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 DENND5AQ6IQ26 1287 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 RANBP10Q6VN20 620 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 ZNF765Q7L2R6 523 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 IGDCC3Q8IVU1 814 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 RAVER1Q8IY67 606 aaKnown RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 PDIK1LQ8N165 341 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 MPP5Q8N3R9 675 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 EXD3Q8N9H8 876 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 ZDHHC1Q8WTX9 485 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 PATE1Q8WXA2 126 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 ANKRD7Q92527 254 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 USP7Q93009 1102 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 SCAMP4Q969E2 229 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 ZBTB9Q96C00 473 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 MED8Q96G25 268 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 TRIM56Q9BRZ2 755 aaKnown RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 FSD1LQ9BXM9 530 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 FAM129AQ9BZQ8 928 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 RDH14Q9HBH5 336 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 CASS4Q9NQ75 786 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 HAUS2Q9NVX0 235 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 PDP2Q9P2J9 529 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 PISDQ9UG56 409 aa11.42□□□□□ -0.58
HLA-C-206ENST00000470363 CNOT6Q9ULM6 557 aaKnown RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 PCYT1BQ9Y5K3 369 aaPredicted RBP11.42□□□□□ -0.58
HLA-C-206ENST00000470363 IGHV5-10-1A0A0J9YXX1 117 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 LOC285095A0A1B0GVY8 99 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 B8ZZF3 427 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 SMAPO00193 183 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 DYNC1I1O14576 645 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 JMJD7P0C870 316 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 CCL4P13236 92 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 CES1P23141 567 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 ELK3P41970 407 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 MAGEA4P43358 317 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 GNPDA1P46926 289 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 STC1P52823 247 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 CDK18Q07002 472 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 ILF3Q12906 894 aaKnown RBP eCLIP11.41□□□□□ -0.583e-17■□□□□ 9.4
HLA-C-206ENST00000470363 MAP9Q49MG5 647 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 EMBQ6PCB8 327 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 CAPN12Q6ZSI9 719 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 USP53Q70EK8 1073 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 USP45Q70EL2 814 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 CENPUQ71F23 418 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 TMC3Q7Z5M5 1100 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 LINC00523Q86TU6 105 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 PIM3Q86V86 326 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 ZBED8Q8IZ13 594 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 DNAAF3Q8N9W5 541 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 SIGLEC10Q96LC7 697 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 PPP1R2P1Q96PQ5 205 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 TRIB3Q96RU7 358 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 LYSMD1Q96S90 227 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 CMKLR1Q99788 373 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 NUDT22Q9BRQ3 303 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 WDR83Q9BRX9 315 aaKnown RBP11.41□□□□□ -0.58
HLA-C-206ENST00000470363 TDRD1Q9BXT4 1180 aaKnown RBP11.41□□□□□ -0.58
HLA-C-206ENST00000470363 TXLNGYQ9BZA5 131 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 XAB2Q9HCS7 855 aaKnown RBP11.41□□□□□ -0.58
HLA-C-206ENST00000470363 ARGLU1Q9NWB6 273 aaPredicted RBP11.41□□□□□ -0.58
HLA-C-206ENST00000470363 SYBUQ9NX95 663 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 CD84Q9UIB8 345 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 MOSPD1Q9UJG1 213 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 CHMP2BQ9UQN3 213 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 TMEM98Q9Y2Y6 226 aa11.41□□□□□ -0.58
HLA-C-206ENST00000470363 IGHV1OR21-1A0A087WYE8 117 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 CCDC78A2IDD5 438 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 E7ESA3 106 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 HGSO14964 777 aaPredicted RBP11.4□□□□□ -0.58
HLA-C-206ENST00000470363 DNAJC6O75061 913 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 PPFIA2O75334 1257 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 NDST3O95803 873 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 EML2O95834 649 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 PIRTP0C851 137 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 FGF3P11487 239 aaPredicted RBP11.4□□□□□ -0.58
HLA-C-206ENST00000470363 ZNF30P17039 623 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 ITGB6P18564 788 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 NFKBIAP25963 317 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 ALDH4A1P30038 563 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 MAGEA3P43357 314 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 LIMK2P53671 638 aa11.4□□□□□ -0.58
HLA-C-206ENST00000470363 PMS2P54278 862 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms