RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 GPR89AB7ZAQ6 455 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 H3BM21 787 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 PRMT5O14744 637 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 KMOO15229 486 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 AQP9O43315 295 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 RIPK2O43353 540 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 POP7O75817 140 aaKnown RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 EML2O95834 649 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 GPR89BP0CG08 455 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 RALBP11234 206 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 CTSEP14091 401 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 ZNF7P17097 686 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 ITGB6P18564 788 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 RPS3P23396 243 aaKnown RBP eCLIP14.55□□□□□ -0.088e-23■□□□□ 10.5
COL9A3-209ENST00000469852 LEPRP48357 1165 aaKnown RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 BLKP51451 505 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 ATXN3P54252 364 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 UAP1Q16222 522 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 ZNF658BQ4V348 819 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 NAPRTQ6XQN6 538 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 CYS1Q717R9 158 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 ACVR1CQ8NER5 493 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 GPBAR1Q8TDU6 330 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 TTC1Q99614 292 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 FUT8Q9BYC5 575 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 KLC4Q9NSK0 619 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 INTS10Q9NVR2 710 aaKnown RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 TRNAU1APQ9NX07 287 aaKnown RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 GALPQ9UBC7 116 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 SPASTQ9UBP0 616 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 GPR34Q9UPC5 381 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 DNAJC16Q9Y2G8 782 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 MED16Q9Y2X0 877 aa14.55□□□□□ -0.08
COL9A3-209ENST00000469852 ASCC3Q8N3C0 2202 aaKnown RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 ARID1BQ8NFD5 2236 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-209ENST00000469852 ARHGEF17Q96PE2 2063 aaPredicted RBP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 C4orf47A7E2U8 309 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 FFAR2O15552 330 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 DFNA5O60443 496 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 NIPSNAP2O75323 286 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 SPAG6O75602 509 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 FAM155BO75949 473 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 AP2A2O94973 939 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 STX2P32856 288 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 PPARGP37231 505 aaPredicted RBP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 PGGT1BP53609 377 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 NFE2L1Q14494 772 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 INSCQ1MX18 579 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 RSPO4Q2I0M5 234 aaPredicted RBP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 DEFB133Q30KQ1 61 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 RBM20Q5T481 1227 aaKnown RBP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 RNF187Q5TA31 235 aaPredicted RBP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 ZNF449Q6P9G9 518 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 SLC30A9Q6PML9 568 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 TRMT10CQ7L0Y3 403 aaKnown RBP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 STRA8Q7Z7C7 330 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 FAM136AQ96C01 138 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 ATXN7L3BQ96GX2 97 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 LINC00615Q96LM1 132 aaPredicted RBP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 NDNQ99608 321 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 TIMM29Q9BSF4 260 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 MCMBPQ9BTE3 642 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 ACSS3Q9H6R3 686 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 TMEM9BQ9NQ34 198 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 SPATS2LQ9NUQ6 558 aaKnown RBP14.54□□□□□ -0.08
COL9A3-209ENST00000469852 BTBD3Q9Y2F9 522 aa14.54□□□□□ -0.08
COL9A3-209ENST00000469852 YY2O15391 372 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 CTIFO43310 598 aaKnown RBP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 OR56A5P0C7T3 313 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 ZNF883P0CG24 379 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 CD59P13987 128 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 PKMP14618 531 aaKnown RBP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 ACTR1BP42025 376 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 ADARP55265 1226 aaKnown RBP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 ACTR1AP61163 376 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 TIAL1Q01085 375 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 ILF3Q12906 894 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 SLC29A2Q14542 456 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 ELOCQ15369 112 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 UAP1L1Q3KQV9 507 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 KIAA0408Q6ZU52 694 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 TAF8Q7Z7C8 310 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 GALNT7Q86SF2 657 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 SLC26A11Q86WA9 606 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 CTAGE3PQ8IX95 158 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 FSTL5Q8N475 847 aaPredicted RBP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 PPM1NQ8N819 430 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 SCG3Q8WXD2 468 aaKnown RBP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 MRRFQ96E11 262 aaKnown RBP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 ZNF514Q96K75 400 aaPredicted RBP14.53□□□□□ -0.08
COL9A3-209ENST00000469852 SLC30A3Q99726 388 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 TAAR2Q9P1P5 351 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 TBC1D29Q9UFV1 150 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 GNPTGQ9UJJ9 305 aa14.53□□□□□ -0.08
COL9A3-209ENST00000469852 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.52□□□□□ -0.09
COL9A3-209ENST00000469852 MGAT4DA6NG13 374 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 LMO7DNF2Z398 122 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 TRIM38O00635 465 aa14.52□□□□□ -0.09
COL9A3-209ENST00000469852 YKT6O15498 198 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms