RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SCAMP1O15126 338 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 PFKFB2O60825 505 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 ATP2C2O75185 946 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 PDGFRBP09619 1106 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 RALAP11233 206 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 GOT1P17174 413 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 C5AR1P21730 350 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 SLC5A2P31639 672 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 POLE2P56282 527 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 EEFSECP57772 596 aaKnown RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 TNNC1P63316 161 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 KLRB1Q12918 225 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 STK3Q13188 491 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 ZNF177Q13360 481 aaPredicted RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 KCNJ12Q14500 433 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 DHX8Q14562 1220 aaKnown RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 IGFBP7Q16270 282 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 HNRNPA1L2Q32P51 320 aaKnown RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 MPPE1Q53F39 396 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 C10orf120Q5SQS8 335 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 SLC39A4Q6P5W5 647 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 TRIM69Q86WT6 500 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 HEATR4Q86WZ0 1026 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 SPATS2Q86XZ4 545 aaKnown RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 ARHGAP18Q8N392 663 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 SLC25A45Q8N413 288 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.8□□□□□ -1.64
VPS8-219ENST00000469479 PNLDC1Q8NA58 520 aaKnown RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 OR6B3Q8NGW1 331 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 DDI1Q8WTU0 396 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 PRR11Q96HE9 360 aaPredicted RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 FUCA2Q9BTY2 467 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 ZNF518BQ9C0D4 1074 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 FOXP1Q9H334 677 aaPredicted RBP4.8□□□□□ -1.64
VPS8-219ENST00000469479 PNPLA8Q9NP80 782 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 PLK2Q9NYY3 685 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 CLIC5Q9NZA1 410 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 SEL1LQ9UBV2 794 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 SCML2Q9UQR0 700 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 CKAP5Q14008 2032 aa4.8□□□□□ -1.64
VPS8-219ENST00000469479 ICE1Q9Y2F5 2266 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3DA0A087WVF3 549 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3IA0A087WXS9 549 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3EA0A087X179 549 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3KA0A087X1G2 549 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 EME2A4GXA9 379 aaPredicted RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3FA6NER0 549 aaPredicted RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 A8MXQ7 604 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3LB9A6J9 549 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TPP1O14773 563 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 FFAR2O15552 330 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 SDC3O75056 442 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 PIAS2O75928 621 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 KRT18P05783 430 aaKnown RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3HP0C7X1 549 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 PLA2G4BP0C869 781 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 POLR2EP19388 210 aaKnown RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 LMO2P25791 158 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 MTNR1BP49286 362 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 ADPRHP54922 357 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 SLC12A3P55017 1021 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 ALCAMQ13740 583 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 CLCA4Q14CN2 919 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 FLYWCH1Q4VC44 716 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 DCAF6Q58WW2 860 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 MPP7Q5T2T1 576 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3GQ6DHY5 549 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3CQ6IPX1 549 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 NEK5Q6P3R8 708 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 CHST9Q7L1S5 443 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 RAB11FIP2Q7L804 512 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TIPARPQ7Z3E1 657 aaKnown RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 KIAA0907Q7Z7F0 614 aaPredicted RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 CHSY1Q86X52 802 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 CCDC117Q8IWD4 279 aaPredicted RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 FAM217AQ8IXS0 508 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TBC1D3Q8IZP1 549 aaPredicted RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 FBXO39Q8N4B4 442 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 NRACQ8N912 160 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 OR6C4Q8NGE1 309 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 SCAMP5Q8TAC9 235 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 FAM136AQ96C01 138 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TMX3Q96JJ7 454 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 LYZL4Q96KX0 146 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 REEP2Q9BRK0 252 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 FAM213AQ9BRX8 229 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 MED10Q9BTT4 135 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 B3GNT5Q9BYG0 378 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 MTMR12Q9C0I1 747 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 CSNK1G1Q9HCP0 422 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 PREBQ9HCU5 417 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.79□□□□□ -1.64
VPS8-219ENST00000469479 AKAP7Q9P0M2 348 aaPredicted RBP4.79□□□□□ -1.64
VPS8-219ENST00000469479 CYTH4Q9UIA0 394 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 SIX4Q9UIU6 781 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 GGA2Q9UJY4 613 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 F8P00451 2351 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 TMEM131Q92545 1883 aa4.79□□□□□ -1.64
VPS8-219ENST00000469479 HIVEP1P15822 2718 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms