RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 TCRBV3S1A0A5B6 114 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 PRMT5O14744 637 aaPredicted RBP17.6■□□□□ 0.41
MCF2L-221ENST00000469415 RSL1D1O76021 490 aaKnown RBP17.6■□□□□ 0.41
MCF2L-221ENST00000469415 ALDH1A1P00352 501 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 IL10P22301 178 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 PSMA4P25789 261 aaKnown RBP17.6■□□□□ 0.41
MCF2L-221ENST00000469415 AP5B1Q2VPB7 878 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 KLHDC10Q6PID8 442 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 LRRC43Q8N309 656 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 TTC30BQ8N4P2 665 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 GFM2Q969S9 779 aaKnown RBP17.6■□□□□ 0.41
MCF2L-221ENST00000469415 IGSF21Q96ID5 467 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 KANSL1LA0AUZ9 987 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 PABPC4LP0CB38 370 aaKnown RBP17.6■□□□□ 0.41
MCF2L-221ENST00000469415 CPSF6Q16630 551 aaKnown RBP eCLIP17.6■□□□□ 0.41
MCF2L-221ENST00000469415 C11orf91Q3C1V1 193 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 TMEM214Q6NUQ4 689 aaKnown RBP17.6■□□□□ 0.41
MCF2L-221ENST00000469415 TSPAN14Q8NG11 270 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 MYO19Q96H55 970 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 ZFYVE1Q9HBF4 777 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 IL17CQ9P0M4 197 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 MTRRQ9UBK8 725 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 LHX3Q9UBR4 397 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 CHD7Q9P2D1 2997 aa17.6■□□□□ 0.41
MCF2L-221ENST00000469415 NRG2O14511 850 aaPredicted RBP17.59■□□□□ 0.41
MCF2L-221ENST00000469415 EI24O14681 340 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 B3GALT4O96024 378 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 UROSP10746 265 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 ZNF23P17027 643 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 GABRR2P28476 465 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 WEE1P30291 646 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 SLC8B1Q6J4K2 584 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 NANOGP8Q6NSW7 305 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 NCEH1Q6PIU2 408 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 GOLGA7Q7Z5G4 137 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 HS6ST3Q8IZP7 471 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 NAT16Q8N8M0 369 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 OCEL1Q9H607 264 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 NANOGQ9H9S0 305 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 MRPL40Q9NQ50 206 aaKnown RBP17.59■□□□□ 0.41
MCF2L-221ENST00000469415 WWOXQ9NZC7 414 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 PFDN6O15212 129 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 GSNP06396 782 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 NKX3-2P78367 333 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 CHRNA6Q15825 494 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 CDC26Q8NHZ8 85 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 PROKR1Q8TCW9 393 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 TRIM17Q9Y577 477 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 PATJQ8NI35 1801 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 MYOFQ9NZM1 2061 aa17.59■□□□□ 0.41
MCF2L-221ENST00000469415 A0A1W2PP18 115 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 FFAR2O15552 330 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 S100BP04271 92 aaPredicted RBP17.58■□□□□ 0.41
MCF2L-221ENST00000469415 PCSK6P29122 969 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 NEK2P51955 445 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 IST1P53990 364 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 HSPA14Q0VDF9 509 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 NOGQ13253 232 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 INPP5AQ14642 412 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 GALNT7Q86SF2 657 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 BBS7Q8IWZ6 715 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 FATE1Q969F0 183 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 BEGAINQ9BUH8 593 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 THUMPD3Q9BV44 507 aaKnown RBP17.58■□□□□ 0.41
MCF2L-221ENST00000469415 TTLL2Q9BWV7 592 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 KLF16Q9BXK1 252 aaPredicted RBP17.58■□□□□ 0.41
MCF2L-221ENST00000469415 SMOXQ9NWM0 555 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 ETAA1Q9NY74 926 aa17.58■□□□□ 0.41
MCF2L-221ENST00000469415 TYW5A2RUC4 315 aaKnown RBP17.58■□□□□ 0.4
MCF2L-221ENST00000469415 VILLO15195 856 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 FASP25445 335 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 HNF1BP35680 557 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 BCL2L1Q07817 233 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 GTF2H2Q13888 395 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 PYCR3Q53H96 274 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 GTF2H2CQ6P1K8 395 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 EPHX4Q8IUS5 362 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 KRTCAP2Q8N6L1 136 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 FIG4Q92562 907 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 TMEM125Q96AQ2 219 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 ROPN1LQ96C74 230 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 ASIC4Q96FT7 647 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 GPATCH1Q9BRR8 931 aaKnown RBP17.58■□□□□ 0.4
MCF2L-221ENST00000469415 RPF2Q9H7B2 306 aaKnown RBP17.58■□□□□ 0.4
MCF2L-221ENST00000469415 IL26Q9NPH9 171 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 AIG1Q9NVV5 245 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 CFAP97Q9P2B7 532 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 ARIH1Q9Y4X5 557 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-221ENST00000469415 CALRP27797 417 aaKnown RBP17.58■□□□□ 0.4
MCF2L-221ENST00000469415 CD70P32970 193 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 CLCN7P51798 805 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 LAPTM5Q13571 262 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 ANKRD46Q86W74 232 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 CMTM8Q8IZV2 173 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 FBXO30Q8TB52 745 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 AURKBQ96GD4 344 aaPredicted RBP17.58■□□□□ 0.4
MCF2L-221ENST00000469415 ASB2Q96Q27 587 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 TCF12Q99081 682 aa17.58■□□□□ 0.4
MCF2L-221ENST00000469415 MRPL9Q9BYD2 267 aaKnown RBP17.58■□□□□ 0.4
MCF2L-221ENST00000469415 LTB4R2Q9NPC1 389 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms