RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TIGD2Q4W5G0 525 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 EIF3MQ7L2H7 374 aaKnown RBP14.9□□□□□ -0.02
LIMS2-213ENST00000469300 POMGNT2Q8NAT1 580 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 LMO3Q8TAP4 145 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 TWIST2Q8WVJ9 160 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 DDX1Q92499 740 aaKnown RBP14.9□□□□□ -0.02
LIMS2-213ENST00000469300 NOL11Q9H8H0 719 aaKnown RBP14.9□□□□□ -0.02
LIMS2-213ENST00000469300 COL16A1Q07092 1604 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-213ENST00000469300 PEX1O43933 1283 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 TMEM63AO94886 807 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 MPSTP25325 297 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 DNAJB1P25685 340 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 HSPA7P48741 367 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 AP1S2P56377 157 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 CDC42P60953 191 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 GTF2H2Q13888 395 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 C2orf27AQ580R0 203 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 ARL13AQ5H913 290 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-213ENST00000469300 GTF2H2CQ6P1K8 395 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 GATAD2AQ86YP4 633 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 CMTM8Q8IZV2 173 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 MS4A4AQ96JQ5 239 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 MARK4Q96L34 752 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 TEFMQ96QE5 360 aaKnown RBP14.9□□□□□ -0.02
LIMS2-213ENST00000469300 TBC1D10AQ9BXI6 508 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 ATG10Q9H0Y0 220 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 SFXN1Q9H9B4 322 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 UPK3BL1B0FP48 263 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 UPK3BL2E5RIL1 263 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 DNAJA2O60884 412 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 FAM155BO75949 473 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 TYRP14679 529 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 STX4Q12846 297 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 ITPRIPL2Q3MIP1 535 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 ARSIQ5FYB1 569 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 C9orf64Q5T6V5 341 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 TTC29Q8NA56 475 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-213ENST00000469300 TSSK3Q96PN8 268 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 ABCG8Q9H221 673 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 RIBC2Q9H4K1 309 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 NWD2Q9ULI1 1742 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 A0A0J9YYE9 177 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 LEFTY2O00292 366 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 PRAMEF11O60813 436 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 CFHP08603 1231 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 FAM182AQ5T1J6 154 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 HID1Q8IV36 788 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 TTLQ8NG68 377 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 PDLIM7Q9NR12 457 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 DNAJB4Q9UDY4 337 aa14.9□□□□□ -0.02
LIMS2-213ENST00000469300 NHSL1Q5SYE7 1610 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 CHRNA1P02708 482 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 KLF10Q13118 480 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 C15orf39Q6ZRI6 1047 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 PRR23CQ6ZRP0 262 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 CHST15Q7LFX5 561 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-213ENST00000469300 PARGQ86W56 976 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 PHF10Q8WUB8 498 aaKnown RBP14.89□□□□□ -0.03
LIMS2-213ENST00000469300 NACC2Q96BF6 587 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 TSGA13Q96PP4 275 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 SLC38A3Q99624 504 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 LMAN2LQ9H0V9 348 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 NOL6Q9H6R4 1146 aaKnown RBP14.89□□□□□ -0.03
LIMS2-213ENST00000469300 KLHL3Q9UH77 587 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 C5P01031 1676 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 GTPBP1O00178 669 aaKnown RBP14.89□□□□□ -0.03
LIMS2-213ENST00000469300 OAZ2O95190 189 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 FYNP06241 537 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 GJA1P17302 382 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 CHRNA4P43681 627 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 CCDC142Q17RM4 750 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 ARMCX4Q5H9R4 360 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 TYW3Q6IPR3 259 aaKnown RBP14.89□□□□□ -0.03
LIMS2-213ENST00000469300 SIX5Q8N196 739 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 DEPDC4Q8N2C3 294 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 CNTD1Q8N815 330 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 ZSCAN18Q8TBC5 510 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-213ENST00000469300 ADAMTS15Q8TE58 950 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 CLIP3Q96DZ5 547 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 LRIG1Q96JA1 1093 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 EURLQ9NYK6 297 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 MTRRQ9UBK8 725 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 PHF24Q9UPV7 400 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 MYRFQ9Y2G1 1151 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 TK2O00142 265 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 SLC1A2P43004 574 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 CCNHP51946 323 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-213ENST00000469300 PTPN5P54829 565 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 MTTPP55157 894 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 KCNJ2P63252 427 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 AAK1Q2M2I8 961 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 PPM1JQ5JR12 505 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 C22orf39Q6P5X5 142 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 AAGABQ6PD74 315 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 FSTL5Q8N475 847 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-213ENST00000469300 Q96MT0 163 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 TUBGCP5Q96RT8 1024 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 AGAP2Q99490 1192 aa14.89□□□□□ -0.03
LIMS2-213ENST00000469300 ADI1Q9BV57 179 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms