RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ZP2Q05996 745 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF252P-AS1Q0IIN9 211 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FAPQ12884 760 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 LAPTM5Q13571 262 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CEACAM7Q14002 265 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FRG1Q14331 258 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MFSD13AQ14CX5 517 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PSMD5Q16401 504 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CTF1Q16619 201 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 HADHQ16836 314 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TIMM50Q3ZCQ8 353 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CYBRD1Q53TN4 286 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZC3H12BQ5HYM0 836 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SYT6Q5T7P8 510 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ELP2Q6IA86 826 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 LCN8Q6JVE9 175 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TIGD7Q6NT04 549 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 AADACL2Q6P093 401 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 LLGL2Q6P1M3 1020 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CYP20A1Q6UW02 462 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZNF517Q6ZMY9 492 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DPY19L3Q6ZPD9 716 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 RRM2BQ7LG56 351 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KCNK18Q7Z418 384 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ATG4DQ86TL0 474 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ASPGQ86U10 573 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FAM83AQ86UY5 434 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 P2RY8Q86VZ1 359 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PROSER1Q86XN7 944 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ADGRG5Q8IZF4 528 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 IFNL2Q8IZJ0 200 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MCOLN2Q8IZK6 566 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MPP5Q8N3R9 675 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SVOPLQ8N434 492 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CBR4Q8N4T8 237 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TTLL6Q8N841 843 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NIPA2Q8N8Q9 360 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ANKRD52Q8NB46 1076 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TRPV3Q8NET8 790 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 BPIFB6Q8NFQ5 453 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 OR7D4Q8NG98 312 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MCFD2Q8NI22 146 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PSMA8Q8TAA3 256 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZFP90Q8TF47 636 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KCTD4Q8WVF5 259 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CYGBQ8WWM9 190 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 IPCEF1Q8WWN9 437 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ATG4AQ8WYN0 398 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 LRTOMTQ8WZ04 291 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CPT1BQ92523 772 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SLC9A6Q92581 669 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 GTF2H4Q92759 462 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 GJA10Q969M2 543 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DACT3Q96B18 629 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ELMO3Q96BJ8 720 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NXNL1Q96CM4 212 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TOE1Q96GM8 510 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ELMO2Q96JJ3 720 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FAM20AQ96MK3 541 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MBOAT7Q96N66 472 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KLHL32Q96NJ5 620 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SERPINB11Q96P15 392 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NECAB3Q96P71 396 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SLITRK1Q96PX8 696 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NODALQ96S42 347 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FAM118BQ9BPY3 351 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 EBF4Q9BQW3 602 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FEM1AQ9BSK4 669 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ISCA1Q9BUE6 129 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 HTATIP2Q9BUP3 242 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SPATA9Q9BWV2 254 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 IDI2Q9BXS1 227 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NXF2Q9GZY0 626 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 LHPPQ9H008 270 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NUAK2Q9H093 628 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 GAREM1Q9H706 876 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KAT8Q9H7Z6 458 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 NOL11Q9H8H0 719 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 COG4Q9H9E3 785 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FBRSQ9HAH7 460 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 C3orf14Q9HBI5 128 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ZFP14Q9HCL3 533 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 WDR6Q9NNW5 1121 aaKnown RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 UBE2TQ9NPD8 197 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 POLE3Q9NRF9 147 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 MED9Q9NWA0 146 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 PAQR5Q9NXK6 330 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SCN3BQ9NY72 215 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 TAS2R9Q9NYW1 312 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 USE1Q9NZ43 259 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ADA2Q9NZK5 511 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 ACTR3BQ9P1U1 418 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 FNIP2Q9P278 1114 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 LRP2BPQ9P2M1 347 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 DUX4Q9UBX2 424 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 KLQ9UEF7 1012 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CD300AQ9UGN4 299 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 SRRDQ9UH36 339 aa4.81□□□□□ -1.64
SF3B1-207ENST00000468925 CHORDC1Q9UHD1 332 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-207ENST00000468925 OSGIN1Q9UJX0 560 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms