RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 TMCO1Q9UM00 188 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 XIRP2A4UGR9 3374 aa18.69■□□□□ 0.58
SMC4-209ENST00000468653 QSOX1O00391 747 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 KPNA5O15131 536 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 ADAM23O75077 832 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 UBOX5O94941 541 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 FTH1P02794 183 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 DNTTP04053 509 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 AOAHP28039 575 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 HK2P52789 917 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 TAS2R38P59533 333 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 UNC50Q53HI1 259 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 IER5LQ5T953 404 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 FRMD7Q6ZUT3 714 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 TRMOQ9BU70 441 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 FAM126AQ9BYI3 521 aaPredicted RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 MKRN2Q9H000 416 aaKnown RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 MYLK2Q9H1R3 596 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 STN1Q9H668 368 aaKnown RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 FBXL12Q9NXK8 326 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 SERGEFQ9UGK8 458 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 ZDHHC2Q9UIJ5 367 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 HAO1Q9UJM8 370 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 PIKFYVEQ9Y2I7 2098 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 COL4A2P08572 1712 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 IGLON5A6NGN9 336 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 OR2AG2A6NM03 316 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 ANKRD65E5RJM6 399 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 K7ESM1 405 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 TM7SF2O76062 418 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 SIX3O95343 332 aaPredicted RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 SOD1P00441 154 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 ALOX15P16050 662 aaPredicted RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 SERPINB3P29508 390 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 TMEM115Q12893 351 aaPredicted RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 SMAD2Q15796 467 aaKnown RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 HSF5Q4G112 596 aaPredicted RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 RPS27LQ71UM5 84 aaKnown RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 NLRP8Q86W28 1048 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 TMPRSS6Q8IU80 811 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 PELI3Q8N2H9 469 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 GSTO2Q9H4Y5 243 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 DNAJC28Q9NX36 388 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 UTP6Q9NYH9 597 aaKnown RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 ZFP69BQ9UJL9 534 aa18.68■□□□□ 0.58
SMC4-209ENST00000468653 CNOT6Q9ULM6 557 aaKnown RBP18.68■□□□□ 0.58
SMC4-209ENST00000468653 A0A1W2PQF6 199 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 SLCO1B7G3V0H7 640 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 DIAPH2O60879 1101 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 S100BP04271 92 aaPredicted RBP18.67■□□□□ 0.58
SMC4-209ENST00000468653 ENO3P13929 434 aaPredicted RBP18.67■□□□□ 0.58
SMC4-209ENST00000468653 FOSL2P15408 326 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 COL9A1P20849 921 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 EEF1DP29692 281 aaKnown RBP18.67■□□□□ 0.58
SMC4-209ENST00000468653 HK3P52790 923 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 ALDH18A1P54886 795 aaKnown RBP18.67■□□□□ 0.58
SMC4-209ENST00000468653 HSPA14Q0VDF9 509 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 BOP1Q14137 746 aaKnown RBP18.67■□□□□ 0.58
SMC4-209ENST00000468653 TGFBIQ15582 683 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 LACTB2Q53H82 288 aaPredicted RBP18.67■□□□□ 0.58
SMC4-209ENST00000468653 SH2D4BQ5SQS7 431 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 Q7L0L9 218 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 MAVSQ7Z434 540 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 RASGEF1AQ8N9B8 481 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 FAM3CQ92520 227 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 ELMO1Q92556 727 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 EBF4Q9BQW3 602 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 ZCCHC2Q9C0B9 1178 aaKnown RBP18.67■□□□□ 0.58
SMC4-209ENST00000468653 COG4Q9H9E3 785 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 NUDT4Q9NZJ9 180 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 LRRK1Q38SD2 2015 aa18.67■□□□□ 0.58
SMC4-209ENST00000468653 LRRC14BA6NHZ5 514 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 STX16-NPEPL1H3BU86 382 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 EIF3FO00303 357 aaPredicted RBP18.66■□□□□ 0.58
SMC4-209ENST00000468653 MATN2O00339 956 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 STX16O14662 325 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 RAD51BO15315 384 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 SGTAO43765 313 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 KLK8O60259 260 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 IDH3AP50213 366 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 GALNT1Q10472 559 aaPredicted RBP18.66■□□□□ 0.58
SMC4-209ENST00000468653 FBXO43Q4G163 708 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 PLEKHS1Q5SXH7 462 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 SEL1L3Q68CR1 1132 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 SBSNQ6UWP8 590 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 CYHR1Q6ZMK1 362 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 AFAP1L2Q8N4X5 818 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 BEND7Q8N7W2 519 aaPredicted RBP18.66■□□□□ 0.58
SMC4-209ENST00000468653 SKA1Q96BD8 255 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 MSANTD3Q96H12 275 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 SLC6A17Q9H1V8 727 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 VTI1BQ9UEU0 232 aa18.66■□□□□ 0.58
SMC4-209ENST00000468653 APOBEC2Q9Y235 224 aaKnown RBP18.66■□□□□ 0.58
SMC4-209ENST00000468653 ZNF195O14628 629 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 HDAC3O15379 428 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 ATG13O75143 517 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 CDH13P55290 713 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 GALNTL6Q49A17 601 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 SLC44A4Q53GD3 710 aa18.65■□□□□ 0.58
SMC4-209ENST00000468653 VWA5B1Q5TIE3 1220 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms