RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 NENFQ9UMX5 172 aa12.8□□□□□ -0.36
PTPN7-207ENST00000468385 FARSAQ9Y285 508 aaKnown RBP12.8□□□□□ -0.36
PTPN7-207ENST00000468385 SPTBN1Q01082 2364 aaKnown RBP12.8□□□□□ -0.36
PTPN7-207ENST00000468385 SHANK1Q9Y566 2161 aa12.8□□□□□ -0.36
PTPN7-207ENST00000468385 A0A1W2PQJ5 194 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 KCNJ13O60928 360 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 CPNE3O75131 537 aaKnown RBP12.79□□□□□ -0.36
PTPN7-207ENST00000468385 CEACAM4O75871 244 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 MT-CYBP00156 380 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-207ENST00000468385 SERPING1P05155 500 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 LPOP22079 712 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-207ENST00000468385 PTGIRP43119 386 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 AP1B1Q10567 949 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 GPS2Q13227 327 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
PTPN7-207ENST00000468385 GTF2H3Q13889 308 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 INPP5JQ15735 1006 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-207ENST00000468385 SLC14A2Q15849 920 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 PRR30Q53SZ7 412 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-207ENST00000468385 IZUMO3Q5VZ72 239 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 FAM83HQ6ZRV2 1179 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-207ENST00000468385 AMZ2Q86W34 360 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 KMT5CQ86Y97 462 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 Q8NA96 180 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 SLC38A9Q8NBW4 561 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 SPATA22Q8NHS9 363 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 ADAMTS17Q8TE56 1095 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 ZNF501Q96CX3 271 aaPredicted RBP12.79□□□□□ -0.36
PTPN7-207ENST00000468385 CBX8Q9HC52 389 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 HEY1Q9Y5J3 304 aa12.79□□□□□ -0.36
PTPN7-207ENST00000468385 A1L4Q6 167 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 OR5K3A6NET4 321 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 TLCD2A6NGC4 264 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 TCP11X1B4DZS4 312 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 SCRG1O75711 98 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 POP7O75817 140 aaKnown RBP12.78□□□□□ -0.36
PTPN7-207ENST00000468385 NDST3O95803 873 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 CA5AP35218 305 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 CTSCP53634 463 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 TUBB4BP68371 445 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 HSD11B2P80365 405 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 TUBB2AQ13885 445 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 NFKBIBQ15653 356 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 CHRNA6Q15825 494 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 DNTTIP2Q5QJE6 756 aaKnown RBP12.78□□□□□ -0.36
PTPN7-207ENST00000468385 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 KLHL35Q6PF15 583 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 NPNTQ6UXI9 565 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 RASGEF1AQ8N9B8 481 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 GDAP1Q8TB36 358 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 BRSK1Q8TDC3 778 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 MR1Q95460 341 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 OLFM3Q96PB7 478 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 CD180Q99467 661 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 TUBB2BQ9BVA1 445 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 XPO4Q9C0E2 1151 aaKnown RBP12.78□□□□□ -0.36
PTPN7-207ENST00000468385 CHST8Q9H2A9 424 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 KCND1Q9NSA2 647 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 CTTNBP2NLQ9P2B4 639 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 PSMD13Q9UNM6 376 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 ZNF451Q9Y4E5 1061 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 PCDHGB7Q9Y5F8 929 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 UNC79Q9P2D8 2635 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 NOTCH2Q04721 2471 aa12.78□□□□□ -0.36
PTPN7-207ENST00000468385 UBA6A0AVT1 1052 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-207ENST00000468385 C3orf70A6NLC5 250 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-207ENST00000468385 GPR39O43194 453 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 HMGCLP35914 325 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 PBX1P40424 430 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 ARL4DP49703 201 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 PDE1BQ01064 536 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 MRPL49Q13405 166 aaKnown RBP12.77□□□□□ -0.37
PTPN7-207ENST00000468385 NFE2L1Q14494 772 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 PLCL1Q15111 1095 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 NOMO1Q15155 1222 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 GPR19Q15760 415 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
PTPN7-207ENST00000468385 ZFYVE27Q5T4F4 411 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 LCN10Q6JVE6 187 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 JMJD6Q6NYC1 403 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-207ENST00000468385 TMEM220Q6QAJ8 160 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 B4GALNT4Q76KP1 1039 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 TMEM126BQ8IUX1 230 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 TTC30BQ8N4P2 665 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 FDCSPQ8NFU4 85 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 DTX3LQ8TDB6 740 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 TTC25Q96NG3 672 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 LRFN5Q96NI6 719 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 SRPK1Q96SB4 655 aaKnown RBP12.77□□□□□ -0.37
PTPN7-207ENST00000468385 GLOD4Q9HC38 313 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 IL26Q9NPH9 171 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 HRASLS2Q9NWW9 162 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 LUZP4Q9P127 313 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 UVRAGQ9P2Y5 699 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 CFAP20Q9Y6A4 193 aaKnown RBP12.77□□□□□ -0.37
PTPN7-207ENST00000468385 DNMT3AQ9Y6K1 912 aaPredicted RBP12.77□□□□□ -0.37
PTPN7-207ENST00000468385 MED13Q9UHV7 2174 aa12.77□□□□□ -0.37
PTPN7-207ENST00000468385 LRRD1A4D1F6 860 aa12.76□□□□□ -0.37
PTPN7-207ENST00000468385 ZNF487B1APH4 448 aa12.76□□□□□ -0.37
PTPN7-207ENST00000468385 APOL1O14791 398 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms