RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CXorf40BQ96DE9 158 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 THOC3Q96J01 351 aaKnown RBP11.35□□□□□ -0.59
VPS26A-204ENST00000467852 ABCG8Q9H221 673 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 CLEC4MQ9H2X3 399 aaPredicted RBP11.35□□□□□ -0.59
VPS26A-204ENST00000467852 SYNCQ9H7C4 482 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 NEUROD4Q9HD90 331 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 KCNJ16Q9NPI9 418 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 PLCB1Q9NQ66 1216 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 KLC4Q9NSK0 619 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 GPATCH2LQ9NWQ4 482 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 IL17CQ9P0M4 197 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 CD84Q9UIB8 345 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 PPT2Q9UMR5 302 aa11.35□□□□□ -0.59
VPS26A-204ENST00000467852 LUC7L2Q9Y383 392 aaKnown RBP11.35□□□□□ -0.59
VPS26A-204ENST00000467852 FAM237BA0A1B0GVD1 139 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 PDZK1P1A8MUH7 402 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 E9PLN8 166 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SOCS6O14544 535 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 ALOX12BO75342 701 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 CRLF1O75462 422 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 ZNF202O95125 648 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SIX3O95343 332 aaPredicted RBP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 LCA5LO95447 670 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 MLYCDO95822 493 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 IFNA2P01563 188 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 ATP1A1P05023 1023 aaKnown RBP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 MYBL2P10244 700 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 KRT5P13647 590 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 YBEYP58557 167 aaPredicted RBP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 NRG1Q02297 640 aaPredicted RBP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SHEQ5VZ18 495 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 TRIM72Q6ZMU5 477 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 CHSY3Q70JA7 882 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 RRAGAQ7L523 313 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 FAM131BQ86XD5 332 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 ASB5Q8WWX0 329 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SNX21Q969T3 373 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 TBC1D31Q96DN5 1066 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 COX4I2Q96KJ9 171 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SECISBP2Q96T21 854 aaKnown RBP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 VKORC1Q9BQB6 163 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SYTL2Q9HCH5 934 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 C1GALT1Q9NS00 363 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SEPT11Q9NVA2 429 aaKnown RBP11.34□□□□□ -0.59
VPS26A-204ENST00000467852 LRFN1Q9P244 771 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SERTAD3Q9UJW9 196 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 SMC3Q9UQE7 1217 aa11.34□□□□□ -0.59
VPS26A-204ENST00000467852 A0A1W2PQ67 120 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 NKX2-6A6NCS4 301 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 IDSB3KWA1 339 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 TMEM150CB9EJG8 249 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 TRAFD1O14545 582 aaPredicted RBP11.33□□□□□ -0.6
VPS26A-204ENST00000467852 CETN3O15182 167 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 KLHL18O94889 574 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 RAF1P04049 648 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 IDSP22304 550 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 RUNX1T1Q06455 604 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 KEAP1Q14145 624 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 KRTCAP3Q53RY4 240 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 MANEALQ5VSG8 457 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 NLRP8Q86W28 1048 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 CLYBLQ8N0X4 340 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 AGAP11Q8TF27 550 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 THAP3Q8WTV1 239 aaPredicted RBP11.33□□□□□ -0.6
VPS26A-204ENST00000467852 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 TLR10Q9BXR5 811 aa11.33□□□□□ -0.6
VPS26A-204ENST00000467852 ZANQ9Y493 2812 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 C17orf113A0A1B0GUU1 675 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 FAM90A27PA6NNH2 459 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 E7EQ34 232 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 LRIG2O94898 1065 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 ERBB2P04626 1255 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 ABOP16442 354 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 GNA15P30679 374 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 RGRP47804 291 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 NKX6-1P78426 367 aaPredicted RBP11.32□□□□□ -0.6
VPS26A-204ENST00000467852 TFF3Q07654 80 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 PARP15Q460N3 678 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 ZNF385CQ66K41 422 aaPredicted RBP11.32□□□□□ -0.6
VPS26A-204ENST00000467852 PAMR1Q6UXH9 720 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 ZDHHC17Q8IUH5 632 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 GRAMD1CQ8IYS0 662 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 CEP57L1Q8IYX8 460 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 WDTC1Q8N5D0 677 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
VPS26A-204ENST00000467852 C1orf131Q8NDD1 294 aaKnown RBP11.32□□□□□ -0.6
VPS26A-204ENST00000467852 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 OR1L3Q8NH93 324 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 SUN3Q8TAQ9 357 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 HAS2Q92819 552 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 SCAMP4Q969E2 229 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 VPS50Q96JG6 964 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 DMRTA2Q96SC8 542 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 GPATCH1Q9BRR8 931 aaKnown RBP11.32□□□□□ -0.6
VPS26A-204ENST00000467852 RNF32Q9H0A6 362 aa11.32□□□□□ -0.6
VPS26A-204ENST00000467852 NOL6Q9H6R4 1146 aaKnown RBP11.32□□□□□ -0.6
VPS26A-204ENST00000467852 PLA2G3Q9NZ20 509 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms