RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 NEU2Q9Y3R4 380 aa4.23□□□□□ -1.73
SSR3-204ENST00000467733 GOLGA8IPA6NC78 632 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 GOLGA8JA6NMD2 632 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 HHLA1C9JL84 531 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 BEST1O76090 585 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 AGFG2O95081 481 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 CENPBP07199 599 aaPredicted RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 HMBSP08397 361 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 CCDC130P13994 396 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 GOT1P17174 413 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 POLR2EP19388 210 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 WT1P19544 449 aaPredicted RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 SLC8A1P32418 973 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 PSMD8P48556 350 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 HK3P52790 923 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 POLE2P56282 527 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 MAP3K7CLP57077 242 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 NOMO3P69849 1222 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 COG7P83436 770 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 DSC2Q02487 901 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 EIF3IQ13347 325 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 DHX8Q14562 1220 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 TGIF1Q15583 401 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 ME3Q16798 604 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 FLYWCH1Q4VC44 716 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 MPPE1Q53F39 396 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 SETMARQ53H47 684 aaPredicted RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 MANEAQ5SRI9 462 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 L1TD1Q5T7N2 865 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 ZNF425Q6IV72 752 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 GUSBP11Q6P575 273 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 ZNF720Q7Z2F6 126 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 EFL1Q7Z2Z2 1120 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 TRAPPC11Q7Z392 1133 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 CCDC186Q7Z3E2 898 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 PRPF39Q86UA1 669 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 VASH2Q86V25 355 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 TRIM69Q86WT6 500 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 SKAP1Q86WV1 359 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 DENND1CQ8IV53 801 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 MMAAQ8IVH4 418 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 GPD1LQ8N335 351 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 PRR18Q8N4B5 295 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 AADATQ8N5Z0 425 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 KDM1BQ8NB78 822 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 C9orf43Q8TAL5 461 aaPredicted RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 NOC3LQ8WTT2 800 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 SSC4DQ8WTU2 575 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 JPH3Q8WXH2 748 aaPredicted RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 RAD54LQ92698 747 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 FAM131CQ96AQ9 280 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 MTFMTQ96DP5 389 aaKnown RBP4.22□□□□□ -1.73
SSR3-204ENST00000467733 MVB12AQ96EY5 273 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 C8orf76Q96K31 380 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 ACCSQ96QU6 501 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 CBWD1Q9BRT8 395 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 SIK2Q9H0K1 926 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 SMYD3Q9H7B4 428 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 PNPLA8Q9NP80 782 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 LMBRD1Q9NUN5 540 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 BLOC1S4Q9NUP1 217 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 RLIMQ9NVW2 624 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 ASB6Q9NWX5 421 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 CLIC5Q9NZA1 410 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 SEPT10Q9P0V9 454 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 SEL1LQ9UBV2 794 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 CYTH4Q9UIA0 394 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 RASAL2Q9UJF2 1139 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 CDYLQ9Y232 598 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 PCDHA3Q9Y5H8 950 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 LRP4O75096 1905 aa4.22□□□□□ -1.73
SSR3-204ENST00000467733 ITIH6Q6UXX5 1313 aa4.21□□□□□ -1.73
SSR3-204ENST00000467733 TBC1D3DA0A087WVF3 549 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 TBC1D3IA0A087WXS9 549 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 TBC1D3EA0A087X179 549 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 TBC1D3KA0A087X1G2 549 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 EDDM13A0A1B0GTR0 161 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 TARSL2A2RTX5 802 aaKnown RBP4.21□□□□□ -1.74
SSR3-204ENST00000467733 VWA3AA6NCI4 1184 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 TBC1D3FA6NER0 549 aaPredicted RBP4.21□□□□□ -1.74
SSR3-204ENST00000467733 NEMP2A6NFY4 417 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 TBC1D3LB9A6J9 549 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 D6RAR5 112 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 PRAMEF26H0Y7S4 382 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 F2RL2O00254 374 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 SCAMP1O15126 338 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 NVLO15381 856 aaKnown RBP4.21□□□□□ -1.74
SSR3-204ENST00000467733 SLC7A4O43246 635 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 AKAP10O43572 662 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 PLRG1O43660 514 aaKnown RBP4.21□□□□□ -1.74
SSR3-204ENST00000467733 PRSS23O95084 383 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 LATS1O95835 1130 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 SBK3P0C264 359 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 TBC1D3HP0C7X1 549 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 FAM200BP0CF97 657 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 RALAP11233 206 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 GAP43P17677 238 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 MAT2AP31153 395 aaKnown RBP4.21□□□□□ -1.74
SSR3-204ENST00000467733 DRD3P35462 400 aa4.21□□□□□ -1.74
SSR3-204ENST00000467733 UGT1A5P35504 534 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms