RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	TRPV5	Q9NQA5	729 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	TXLNG	Q9NUQ3	528 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	CD274	Q9NZQ7	290 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	VTI1B	Q9UEU0	232 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	FADS3	Q9Y5Q0	445 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	REV3L	O60673	3130 aa		12.12	□□□□□ -0.47
HDLBP-231	ENST00000467435	ANKRD12	Q6UB98	2062 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	LRRC14B	A6NHZ5	514 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	TMEM233	B4DJY2	109 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	EIF3F	O00303	357 aa	Predicted RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	QSOX1	O00391	747 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	SOX1	O00570	391 aa	Predicted RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	RAD51B	O15315	384 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	INPP4B	O15327	924 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	GRID2	O43424	1007 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	CCDC22	O60826	627 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	SOD1	P00441	154 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	FTH1	P02794	183 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	ENO3	P13929	434 aa	Predicted RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	AOAH	P28039	575 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	NTSR1	P30989	418 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	CCR7	P32248	378 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	ALDH18A1	P54886	795 aa	Known RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	NCALD	P61601	193 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	RPS14	P62263	151 aa	Known RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	CREB5	Q02930	508 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	ACTN3	Q08043	901 aa	Predicted RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	BOP1	Q14137	746 aa	Known RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	TGFBI	Q15582	683 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	PDCD2	Q16342	344 aa	Predicted RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	SLC9B1	Q4ZJI4	515 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	C2orf27A	Q580R0	203 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	TMEM196	Q5HYL7	178 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	AGBL4	Q5VU57	503 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	RAET1G	Q6H3X3	334 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	SDE2	Q6IQ49	451 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	EPGN	Q6UW88	154 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	KIRREL3	Q8IZU9	778 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	MAPK15	Q8TD08	544 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	FAR2	Q96K12	515 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	ASB2	Q96Q27	587 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	KCNK12	Q9HB15	430 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	HEBP1	Q9NRV9	189 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	UTP6	Q9NYH9	597 aa	Known RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	LIMD1	Q9UGP4	676 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	MBD1	Q9UIS9	605 aa	Predicted RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	COLQ	Q9Y215	455 aa	Predicted RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	FIS1	Q9Y3D6	152 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	OARD1	Q9Y530	152 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	RANBP2	P49792	3224 aa	Known RBP	12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435	LAMA3	Q16787	3333 aa		12.11	□□□□□ -0.47
HDLBP-231	ENST00000467435		A0A1W2PP55	124 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	OR2AG2	A6NM03	316 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	TRPC5OS	A6NMA1	111 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	KPNA5	O15131	536 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	AP1G1	O43747	822 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	SGTA	O43765	313 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	DNAJC8	O75937	253 aa	Predicted RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	FSBP	O95073	299 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	UNC5C	O95185	931 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	CBX6	O95503	412 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	KLF8	O95600	359 aa	Predicted RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	SERPINA6	P08185	405 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	HOXB2	P14652	356 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	TSPAN8	P19075	237 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	DRD1	P21728	446 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	TARS	P26639	723 aa	Known RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	GPR1	P46091	355 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	COPA	P53621	1224 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	CDH13	P55290	713 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	NAA20	P61599	178 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	DPT	Q07507	201 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	GBX1	Q14549	363 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	SKIV2L	Q15477	1246 aa	Known RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	CCDC85B	Q15834	202 aa	Predicted RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	PPP1R3A	Q16821	1122 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	PLEKHS1	Q5SXH7	462 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	FAM91A1	Q658Y4	838 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	ANKS6	Q68DC2	871 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	KIAA1211L	Q6NV74	962 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	ACAD11	Q709F0	780 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	TRMT11	Q7Z4G4	463 aa	Known RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	PELI3	Q8N2H9	469 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	PLCD3	Q8N3E9	789 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	HDDC3	Q8N4P3	179 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	RASGEF1A	Q8N9B8	481 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	PDPR	Q8NCN5	879 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	KCNV2	Q8TDN2	545 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	ZNF483	Q8TF39	744 aa	Predicted RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	STON2	Q8WXE9	905 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	ELMO1	Q92556	727 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	PPP1R36	Q96LQ0	422 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	NSUN5	Q96P11	429 aa	Known RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	C1QTNF3	Q9BXJ4	246 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	NUF2	Q9BZD4	464 aa		12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.1	□□□□□ -0.47
HDLBP-231	ENST00000467435	FBRS	Q9HAH7	460 aa		12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms