RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 FAM227AF5H4B4 570 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 PRRG2O14669 202 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 DDX3YO15523 660 aaKnown RBP12.26□□□□□ -0.45
UBR4-210ENST00000466969 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.45
UBR4-210ENST00000466969 CYP2A6P11509 494 aaPredicted RBP12.26□□□□□ -0.45
UBR4-210ENST00000466969 CHRNB4P30926 498 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 CSNK1DP48730 415 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 CLCNKAP51800 687 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 DCAF17Q5H9S7 520 aaPredicted RBP12.26□□□□□ -0.45
UBR4-210ENST00000466969 OLFML1Q6UWY5 402 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 SLC26A9Q7LBE3 791 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 CPSF7Q8N684 471 aaKnown RBP12.26□□□□□ -0.45
UBR4-210ENST00000466969 MYRIPQ8NFW9 859 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 OR1L3Q8NH93 324 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 COX14Q96I36 57 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 GPR137Q96N19 417 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 CPXM1Q96SM3 734 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 TBCBQ99426 244 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 KLC2Q9H0B6 622 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 SYTL2Q9HCH5 934 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 PLA2G3Q9NZ20 509 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 OR12D3Q9UGF7 316 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 SERTAD3Q9UJW9 196 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 ZANQ9Y493 2812 aa12.26□□□□□ -0.45
UBR4-210ENST00000466969 ANK3Q12955 4377 aaKnown RBP12.25□□□□□ -0.45
UBR4-210ENST00000466969 WISP2O76076 250 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 LETM1O95202 739 aaPredicted RBP12.25□□□□□ -0.45
UBR4-210ENST00000466969 UMODP07911 640 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 MCCD1P59942 119 aaPredicted RBP12.25□□□□□ -0.45
UBR4-210ENST00000466969 SLC6A3Q01959 620 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 CACNG1Q06432 222 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 PCBP2Q15366 365 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBR4-210ENST00000466969 ZFYVE27Q5T4F4 411 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 ZNF385CQ66K41 422 aaPredicted RBP12.25□□□□□ -0.45
UBR4-210ENST00000466969 CEP128Q6ZU80 1094 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 DOLPP1Q86YN1 238 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 HAS2Q92819 552 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 VPS50Q96JG6 964 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 ABCG8Q9H221 673 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 CDC23Q9UJX2 597 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 MRPS2Q9Y399 296 aaKnown RBP12.25□□□□□ -0.45
UBR4-210ENST00000466969 TGP01266 2768 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 ANKRD12Q6UB98 2062 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 NOTCH1P46531 2555 aa12.25□□□□□ -0.45
UBR4-210ENST00000466969 TRAFD1O14545 582 aaPredicted RBP12.24□□□□□ -0.45
UBR4-210ENST00000466969 PHF1O43189 567 aaPredicted RBP12.24□□□□□ -0.45
UBR4-210ENST00000466969 ZNF749O43361 778 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 KLK8O60259 260 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 MTA2O94776 668 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 TPOP07202 933 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 UQCRHP07919 91 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 EPB41P11171 864 aaKnown RBP12.24□□□□□ -0.45
UBR4-210ENST00000466969 ZNF30P17039 623 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 MMP11P24347 488 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 SNX16P57768 344 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 FOXL2P58012 376 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 PMP22Q01453 160 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 SLC25A52Q3SY17 297 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 FAM131BQ86XD5 332 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 P3H2Q8IVL5 708 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 ULK2Q8IYT8 1036 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 ZNF397Q8NF99 534 aaPredicted RBP12.24□□□□□ -0.45
UBR4-210ENST00000466969 KAT5Q92993 513 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 SCAMP4Q969E2 229 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 NT5C3BQ969T7 300 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 TBC1D31Q96DN5 1066 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 SYNCQ9H7C4 482 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 METTL14Q9HCE5 456 aaKnown RBP12.24□□□□□ -0.45
UBR4-210ENST00000466969 L3MBTL1Q9Y468 752 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 FHOD1Q9Y613 1164 aa12.24□□□□□ -0.45
UBR4-210ENST00000466969 A0A1W2PQ67 120 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 OR52A4PA6NMU1 304 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 ADAM10O14672 748 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 CBSLP0DN79 551 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 KRT5P13647 590 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 LHCGRP22888 699 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 CBSP35520 551 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 RGRP47804 291 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 DCDP81605 110 aaKnown RBP12.23□□□□□ -0.45
UBR4-210ENST00000466969 INSCQ1MX18 579 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 TUBB8Q3ZCM7 444 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 ZNF789Q5FWF6 425 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 Q5PR19 223 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 MANEALQ5VSG8 457 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 CARFQ8N187 725 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 TSEN2Q8NCE0 465 aaKnown RBP12.23□□□□□ -0.45
UBR4-210ENST00000466969 C3orf20Q8ND61 904 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 ZNF606Q8WXB4 792 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 AGAP2Q99490 1192 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 BEX4Q9NWD9 120 aaPredicted RBP12.23□□□□□ -0.45
UBR4-210ENST00000466969 MEGF8Q7Z7M0 2845 aa12.23□□□□□ -0.45
UBR4-210ENST00000466969 MAP3K7O43318 606 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 CPP00450 1065 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 F10P00742 488 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 TNFAIP3P21580 790 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 RPL10P27635 214 aaKnown RBP12.22□□□□□ -0.45
UBR4-210ENST00000466969 PREPP48147 710 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 YBEYP58557 167 aaPredicted RBP12.22□□□□□ -0.45
UBR4-210ENST00000466969 DCAF7P61962 342 aa12.22□□□□□ -0.45
UBR4-210ENST00000466969 SLC9A5Q14940 896 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms