RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SORCS1Q8WY21 1168 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 MXD3Q9BW11 206 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 RTN4RQ9BZR6 473 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 EVA1AQ9H8M9 152 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 PDE7BQ9NP56 450 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 MORF4L1Q9UBU8 362 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 RPS6KA6Q9UK32 745 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 PLAGL1Q9UM63 463 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 OR2W1Q9Y3N9 320 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 TTLL3Q9Y4R7 772 aa4.13□□□□□ -1.75
LRCH3-211ENST00000466054 PRAG1Q86YV5 1406 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 ASPDHA6ND91 283 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 GLOD5A6NK44 160 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 C15orf62A8K5M9 175 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 J3QR06 171 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 NDUFS4O43181 175 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 ZBTB43O43298 467 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 RSL1D1O76021 490 aaKnown RBP4.12□□□□□ -1.75
LRCH3-211ENST00000466054 CSPG5O95196 566 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 ITGA2P17301 1181 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 RAD52P43351 418 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 HSD17B4P51659 736 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 SUOXP51687 545 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 STAT2P52630 851 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 TERF1P54274 439 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 PITX1P78337 314 aaPredicted RBP4.12□□□□□ -1.75
LRCH3-211ENST00000466054 COG7P83436 770 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 BAATQ14032 418 aaPredicted RBP4.12□□□□□ -1.75
LRCH3-211ENST00000466054 IRAK1BP1Q5VVH5 260 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 WBP2NLQ6ICG8 309 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 C16orf54Q6UWD8 224 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 INTS8Q75QN2 995 aaKnown RBP4.12□□□□□ -1.75
LRCH3-211ENST00000466054 ENOSF1Q7L5Y1 443 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 PRPF39Q86UA1 669 aaKnown RBP4.12□□□□□ -1.75
LRCH3-211ENST00000466054 KBTBD6Q86V97 674 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 GALNT13Q8IUC8 556 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 MCUQ8NE86 351 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 DBF4BQ8NFT6 615 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 PHF21AQ96BD5 680 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 SLC22A18Q96BI1 424 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 SLC22A12Q96S37 553 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 SMC6Q96SB8 1091 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 DDOQ99489 341 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 SPATC1LQ9H0A9 340 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 LRMDAQ9H2I8 198 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 TCP11L1Q9NUJ3 509 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 MARCH4Q9P2E8 410 aaPredicted RBP4.12□□□□□ -1.75
LRCH3-211ENST00000466054 POLG2Q9UHN1 485 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 TSPYL4Q9UJ04 414 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 KCNG2Q9UJ96 466 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 ZNF148Q9UQR1 794 aa4.12□□□□□ -1.75
LRCH3-211ENST00000466054 PTRH2Q9Y3E5 179 aaKnown RBP4.12□□□□□ -1.75
LRCH3-211ENST00000466054 SYNDIG1LA6NDD5 238 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 DVL1O14640 695 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 KRT36O76013 467 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 TPOP07202 933 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 GM2AP17900 193 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 TRIM21P19474 475 aaKnown RBP4.11□□□□□ -1.75
LRCH3-211ENST00000466054 NR2F2P24468 414 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 LMAN1P49257 510 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 AMPHP49418 695 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 MLLT10P55197 1068 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 ISL1P61371 349 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 SIRPAP78324 504 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 TMF1P82094 1093 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 RUNX1T1Q06455 604 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 ILF3Q12906 894 aaKnown RBP eCLIP4.11□□□□□ -1.75
LRCH3-211ENST00000466054 KRT33BQ14525 404 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 DLG2Q15700 870 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 CCDC96Q2M329 555 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 ZNF718Q3SXZ3 478 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 DHRS7BQ6IAN0 325 aaPredicted RBP4.11□□□□□ -1.75
LRCH3-211ENST00000466054 DNAAF5Q86Y56 855 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 RFLNBQ8N5W9 214 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 C1orf52Q8N6N3 182 aaKnown RBP4.11□□□□□ -1.75
LRCH3-211ENST00000466054 RDM1Q8NG50 284 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 BBS10Q8TAM1 723 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 PAFAH2Q99487 392 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 HGH1Q9BTY7 390 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 CSTL1Q9H114 145 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 DENND2DQ9H6A0 471 aaPredicted RBP4.11□□□□□ -1.75
LRCH3-211ENST00000466054 RETREG1Q9H6L5 497 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.11□□□□□ -1.75
LRCH3-211ENST00000466054 RALYQ9UKM9 306 aaKnown RBP4.11□□□□□ -1.75
LRCH3-211ENST00000466054 YIPF1Q9Y548 306 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 PCDHGA5Q9Y5G8 931 aa4.11□□□□□ -1.75
LRCH3-211ENST00000466054 LOC102723996A0A087X1L8 192 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 OR2M5A3KFT3 312 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 CTAGE9A4FU28 777 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 TMEM189-UBE2V1I3L0A0 370 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 ADAMDEC1O15204 470 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 EIF3DO15371 548 aaKnown RBP eCLIP4.1□□□□□ -1.75
LRCH3-211ENST00000466054 ERAL1O75616 437 aaKnown RBP4.1□□□□□ -1.75
LRCH3-211ENST00000466054 HSP90AA1P07900 732 aaKnown RBP4.1□□□□□ -1.75
LRCH3-211ENST00000466054 CTAGE8P0CG41 777 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 DGKAP23743 735 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 AHRP35869 848 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 FUT6P51993 359 aa4.1□□□□□ -1.75
LRCH3-211ENST00000466054 PSMC6P62333 389 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms