RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ARSDP51689 593 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 ACVR1Q04771 509 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 TXNDC11Q6PKC3 985 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 SNX29P2Q8IUI4 249 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 ADHFE1Q8IWW8 467 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 EID3Q8N140 333 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 SETD9Q8NE22 299 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 SH3RF2Q8TEC5 729 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 FATE1Q969F0 183 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 PCED1BQ96HM7 432 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 REXO5Q96IC2 774 aaKnown RBP19.51■□□□□ 0.71
SDF4-205ENST00000465727 DERL2Q9GZP9 239 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 TRPV5Q9NQA5 729 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 TIMM22Q9Y584 194 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 ORC6Q9Y5N6 252 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 SAGE2PA6NJ88 616 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 TTC34A8MYJ7 566 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 GNGT2O14610 69 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 MRPS14O60783 128 aaKnown RBP19.5■□□□□ 0.71
SDF4-205ENST00000465727 SEC24AO95486 1093 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 GSNP06396 782 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 RENBPP51606 427 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 YWHAHQ04917 246 aaPredicted RBP19.5■□□□□ 0.71
SDF4-205ENST00000465727 EIF4EBP2Q13542 120 aaPredicted RBP19.5■□□□□ 0.71
SDF4-205ENST00000465727 PWP1Q13610 501 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 ATP6AP1LQ52LC2 224 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 SYT6Q5T7P8 510 aaPredicted RBP19.5■□□□□ 0.71
SDF4-205ENST00000465727 TUBA3EQ6PEY2 450 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 SULF1Q8IWU6 871 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 OR5K1Q8NHB7 308 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 SMARCD1Q96GM5 515 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 YME1L1Q96TA2 773 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 HEBP1Q9NRV9 189 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 POU2F3Q9UKI9 436 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 TPRKBQ9Y3C4 175 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 UGT2A1Q9Y4X1 527 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 PMF1-BGLAPU3KQ54 211 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 A0A1B0GTL3 188 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 NOBOXO60393 691 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 GPR32O75388 356 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 ITGAMP11215 1152 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 BMP1P13497 986 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 JUNDP17535 347 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 RABGGTBP53611 331 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 MTPNP58546 118 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 PHC1P78364 1004 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 MVKQ03426 396 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 CDK5R2Q13319 367 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 C6orf136Q5SQH8 315 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 IL31Q6EBC2 164 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 TMEM86AQ8N2M4 240 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 SVOPQ8N4V2 548 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 RTL3Q8N8U3 475 aaKnown RBP19.5■□□□□ 0.71
SDF4-205ENST00000465727 FNDC5Q8NAU1 212 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 SLC47A1Q96FL8 570 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 DACH2Q96NX9 599 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 EPS8L2Q9H6S3 715 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 PARVBQ9HBI1 364 aa19.5■□□□□ 0.71
SDF4-205ENST00000465727 RBMX2Q9Y388 322 aaKnown RBP19.5■□□□□ 0.71
SDF4-205ENST00000465727 UPK1BO75841 260 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 ANGPTL1O95841 491 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 OGNP20774 298 aaKnown RBP19.49■□□□□ 0.71
SDF4-205ENST00000465727 EIF2DP41214 584 aaKnown RBP19.49■□□□□ 0.71
SDF4-205ENST00000465727 ALDH7A1P49419 539 aaKnown RBP19.49■□□□□ 0.71
SDF4-205ENST00000465727 ST13P50502 369 aaKnown RBP19.49■□□□□ 0.71
SDF4-205ENST00000465727 CXCR4P61073 352 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 GPR162Q16538 588 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 ZNF181Q2M3W8 571 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 ATAD3BQ5T9A4 648 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 SPESP1Q6UW49 350 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 CTU1Q7Z7A3 348 aaKnown RBP19.49■□□□□ 0.71
SDF4-205ENST00000465727 SYVN1Q86TM6 617 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 PNPLA1Q8N8W4 532 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 OR2T12Q8NG77 320 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 MCOLN3Q8TDD5 553 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 ERLEC1Q96DZ1 483 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 PPM1MQ96MI6 270 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 ZNF583Q96ND8 569 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 DSN1Q9H410 356 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 TESMINQ9Y4I5 508 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 HSPE1-MOB4S4R3N1 261 aa19.49■□□□□ 0.71
SDF4-205ENST00000465727 BRCA1P38398 1863 aaKnown RBP19.49■□□□□ 0.71
SDF4-205ENST00000465727 RGS13O14921 159 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 GSTA4O15217 222 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 CD3EAPO15446 510 aaKnown RBP19.48■□□□□ 0.71
SDF4-205ENST00000465727 IRAK2O43187 625 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 HS6ST1O60243 411 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 PRKD3O94806 890 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 CYP11A1P05108 521 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 DARSP14868 501 aaKnown RBP19.48■□□□□ 0.71
SDF4-205ENST00000465727 GJC2Q5T442 439 aaPredicted RBP19.48■□□□□ 0.71
SDF4-205ENST00000465727 NANOGNBQ7Z5D8 188 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 AARSD1Q9BTE6 412 aaKnown RBP19.48■□□□□ 0.71
SDF4-205ENST00000465727 BTBD2Q9BX70 525 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 SLIRPQ9GZT3 109 aaKnown RBP19.48■□□□□ 0.71
SDF4-205ENST00000465727 DUSP21Q9H596 190 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 MAGIXQ9H6Y5 334 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 ACTR8Q9H981 624 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 CSNK1G1Q9HCP0 422 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 LTB4R2Q9NPC1 389 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms