RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 GOLGA6L3A6NEY3 463 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 EFCAB7A8K855 629 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 AGAP14A8MT82 685 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 K7ENP7 123 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 LIASO43766 372 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 ZNF189O75820 626 aaPredicted RBP21.37■■□□□ 1.01
LIME1-203ENST00000465591 CRTAMO95727 393 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 TYRP1P17643 537 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 PBLDP30039 288 aaPredicted RBP21.37■■□□□ 1.01
LIME1-203ENST00000465591 AKT1P31749 480 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 FNBP1LQ5T0N5 605 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 MEI1Q5TIA1 1274 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 INO80CQ6PI98 192 aaPredicted RBP21.37■■□□□ 1.01
LIME1-203ENST00000465591 PRUNE1Q86TP1 453 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 SLC13A5Q86YT5 568 aaPredicted RBP21.37■■□□□ 1.01
LIME1-203ENST00000465591 AVL9Q8NBF6 648 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 GPR150Q8NGU9 434 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 RTP4Q96DX8 246 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 DNAJC1Q96KC8 554 aaKnown RBP21.37■■□□□ 1.01
LIME1-203ENST00000465591 TAAR9Q96RI9 348 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 CCNL2Q96S94 520 aaPredicted RBP21.37■■□□□ 1.01
LIME1-203ENST00000465591 SLC40A1Q9NP59 571 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 POT1Q9NUX5 634 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 PSMD13Q9UNM6 376 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 PCDHGA3Q9Y5H0 932 aa21.37■■□□□ 1.01
LIME1-203ENST00000465591 MN1Q10571 1320 aaPredicted RBP21.36■■□□□ 1.01
LIME1-203ENST00000465591 AP2A1O95782 977 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 PRB1P04280 392 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 PRSS56P0CW18 603 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 VCLP18206 1134 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 MSH3P20585 1137 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 CDKN1CP49918 316 aaPredicted RBP21.36■■□□□ 1.01
LIME1-203ENST00000465591 GPR18Q14330 331 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 SEL1L2Q5TEA6 688 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 VASH2Q86V25 355 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 FAM129CQ86XR2 697 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 C1orf54Q8WWF1 131 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 RSC1A1Q92681 617 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 B3GNT4Q9C0J1 378 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 LRRC40Q9H9A6 602 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 LZTFL1Q9NQ48 299 aa21.36■■□□□ 1.01
LIME1-203ENST00000465591 FEZ2Q9UHY8 353 aaPredicted RBP21.36■■□□□ 1.01
LIME1-203ENST00000465591 B4E171 279 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.35■■□□□ 1.01
LIME1-203ENST00000465591 ATXN7O15265 892 aaPredicted RBP21.35■■□□□ 1.01
LIME1-203ENST00000465591 UBXN7O94888 489 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 WT1P19544 449 aaPredicted RBP21.35■■□□□ 1.01
LIME1-203ENST00000465591 TSPAN7P41732 249 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 CCZ1BP86790 482 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 CCZ1P86791 482 aaPredicted RBP21.35■■□□□ 1.01
LIME1-203ENST00000465591 SIX1Q15475 284 aaPredicted RBP21.35■■□□□ 1.01
LIME1-203ENST00000465591 LONRF2Q1L5Z9 754 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 P3H1Q32P28 736 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 KIAA1614Q5VZ46 1190 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 ANKS6Q68DC2 871 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 CCDC81Q6ZN84 652 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 LRRC8AQ8IWT6 810 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 CCDC112Q8NEF3 446 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 JPH3Q8WXH2 748 aaPredicted RBP21.35■■□□□ 1.01
LIME1-203ENST00000465591 CXorf40BQ96DE9 158 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 EPB41L1Q9H4G0 881 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 SLC39A1Q9NY26 324 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 CRLS1Q9UJA2 301 aa21.35■■□□□ 1.01
LIME1-203ENST00000465591 DNMT3AQ9Y6K1 912 aaPredicted RBP21.35■■□□□ 1.01
LIME1-203ENST00000465591 KCNJ13O60928 360 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 C9P02748 559 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 ETS1P14921 441 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 MC4RP32245 332 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 LEPRP48357 1165 aaKnown RBP21.34■■□□□ 1.01
LIME1-203ENST00000465591 PDE1BQ01064 536 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 SNX1Q13596 522 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 POU6F1Q14863 301 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 RPS6KA1Q15418 735 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 RPE65Q16518 533 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 TMEM164Q5U3C3 297 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 METRNLQ641Q3 311 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 SNX20Q7Z614 316 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 NXPE1Q8N323 547 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 LILRA3Q8N6C8 439 aaPredicted RBP21.34■■□□□ 1.01
LIME1-203ENST00000465591 GLIS1Q8NBF1 620 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 CTRCQ99895 268 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 DDA1Q9BW61 102 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 APMAPQ9HDC9 416 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 FAM8A1Q9UBU6 413 aa21.34■■□□□ 1.01
LIME1-203ENST00000465591 CCDC78A2IDD5 438 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 MGAT4DA6NG13 374 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 CD82P27701 267 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 HADHAP40939 763 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 SEPT6Q14141 434 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 BCL7AQ4VC05 210 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 DUS1LQ6P1R4 473 aaKnown RBP21.33■■□□□ 1.01
LIME1-203ENST00000465591 ZNF662Q6ZS27 426 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 PLXDC1Q8IUK5 500 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 OR52K1Q8NGK4 314 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 SLC39A7Q92504 469 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 TTC9Q92623 222 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 ZNF514Q96K75 400 aaPredicted RBP21.33■■□□□ 1.01
LIME1-203ENST00000465591 C9orf72Q96LT7 481 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 TGM7Q96PF1 710 aa21.33■■□□□ 1.01
LIME1-203ENST00000465591 C19orf43Q9BQ61 176 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms