RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PDE1CQ14123 709 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 WDR45BQ5MNZ6 344 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 ZNF648Q5T619 568 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 PHYKPLQ8IUZ5 450 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 RGL4Q8IZJ4 473 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 TTC1Q99614 292 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 COPS8Q99627 209 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 BOCQ9BWV1 1114 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 MIR1-1HGQ9H1L0 117 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 ABCF3Q9NUQ8 709 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 SLC12A4Q9UP95 1085 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 DMDP11532 3685 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 THADAQ6YHU6 1953 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 SPAG17Q6Q759 2223 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 MPOP05164 745 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 BPGMP07738 259 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 HOXC4P09017 264 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 PPARGP37231 505 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 RACK1P63244 317 aaKnown RBP16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 SIM2Q14190 667 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 SPDYAQ5MJ70 313 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 LYSMD4Q5XG99 296 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 CNSTQ6PJW8 725 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 Q6ZSR6 202 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 GALNT7Q86SF2 657 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 DCLK2Q8N568 766 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 ARMC2Q8NEN0 867 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 C10orf82Q8WW14 230 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 LPGAT1Q92604 370 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 TRIM39Q9HCM9 518 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 AASDHPPTQ9NRN7 309 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 PHPT1Q9NRX4 125 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 INTS10Q9NVR2 710 aaKnown RBP16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 TMEM98Q9Y2Y6 226 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 WDR87Q6ZQQ6 2873 aa16.7■□□□□ 0.26
EXOSC3-203ENST00000465229 DCTN3O75935 186 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 RHOBTB1O94844 696 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 NEFHP12036 1026 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 MYCLP1P12525 358 aaPredicted RBP16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 BGNP21810 368 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 TYK2P29597 1187 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 YPEL5P62699 121 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 TMEM115Q12893 351 aaPredicted RBP16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 TPRG1LQ5T0D9 272 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 ADGRG6Q86SQ4 1221 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 LCA5Q86VQ0 697 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 NUDCD3Q8IVD9 361 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 RBFAQ8N0V3 343 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 OR13H1Q8NG92 308 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 NAT14Q8WUY8 206 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 C7orf26Q96N11 449 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 TRIM55Q9BYV6 548 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 RHOJQ9H4E5 214 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 TM9SF3Q9HD45 589 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 SNX15Q9NRS6 342 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 CRYL1Q9Y2S2 319 aa16.69■□□□□ 0.26
EXOSC3-203ENST00000465229 MYO15AQ9UKN7 3530 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 A0A1W2PR77 199 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 CACNB4O00305 520 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 TOR1BO14657 336 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 PFDN6O15212 129 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 PLIN3O60664 434 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 DNAJC8O75937 253 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 WNT1P04628 370 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 ZNF7P17097 686 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 MSH3P20585 1137 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 NSG1P42857 185 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 ABCG1P45844 678 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 RABIFP47224 123 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 CSRP3P50461 194 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 C10orf67Q8IYJ2 551 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 CLDN19Q8N6F1 224 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 MFSD2AQ8NA29 543 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 HEXDCQ8WVB3 486 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 DCUN1D1Q96GG9 259 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 RMDN2Q96LZ7 410 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 BIRC8Q96P09 236 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 GPR22Q99680 433 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 OR2AG1Q9H205 316 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 P2RY12Q9H244 342 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 ATXN10Q9UBB4 475 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 VPS9D1Q9Y2B5 631 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 PRSS21Q9Y6M0 314 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 R4GN57 208 aa16.68■□□□□ 0.26
EXOSC3-203ENST00000465229 UBA6A0AVT1 1052 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 TMEM202A6NGA9 273 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 DLL1O00548 723 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 PRMT5O14744 637 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CDK14O94921 469 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CD38P28907 300 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 AKT1P31749 480 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SKIV2L2P42285 1042 aaKnown RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 CD151P48509 253 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 ADARP55265 1226 aaKnown RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 KIAA1024LP59773 190 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 ILF2Q12905 390 aaKnown RBP16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 BNIP1Q12981 228 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 NFATC4Q14934 902 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SETDB1Q15047 1291 aa16.67■□□□□ 0.26
EXOSC3-203ENST00000465229 SPRED3Q2MJR0 410 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms