RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 OGFRQ9NZT2 677 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 PDP2Q9P2J9 529 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 CRLS1Q9UJA2 301 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 PSMD13Q9UNM6 376 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 ZKSCAN5Q9Y2L8 839 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 PTPRQQ9UMZ3 2332 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 TRBV5-4A0A0C4DH59 114 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 OR51F1A6NGY5 319 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 ERI2A8K979 691 aaKnown RBP12.73□□□□□ -0.37
XRN1-203ENST00000463916 JMJD7P0C870 316 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 THRAP10827 490 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 PSMA3P25788 255 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 SLC5A2P31639 672 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 MAPK9P45984 424 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 CDH17Q12864 832 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 CLPPQ16740 277 aaPredicted RBP12.73□□□□□ -0.37
XRN1-203ENST00000463916 METRNLQ641Q3 311 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 LILRA3Q8N6C8 439 aaPredicted RBP12.73□□□□□ -0.37
XRN1-203ENST00000463916 OR10G6Q8NH81 332 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 STYXQ8WUJ0 223 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 PMEPA1Q969W9 287 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 SH3KBP1Q96B97 665 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 SLC40A1Q9NP59 571 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 CASS4Q9NQ75 786 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 TRMT1Q9NXH9 659 aaKnown RBP12.73□□□□□ -0.37
XRN1-203ENST00000463916 SMARCAL1Q9NZC9 954 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 PAK5Q9P286 719 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 FAM8A1Q9UBU6 413 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 SLC2A6Q9UGQ3 507 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 JRKLQ9Y4A0 524 aa12.73□□□□□ -0.37
XRN1-203ENST00000463916 DNMT3AQ9Y6K1 912 aaPredicted RBP12.73□□□□□ -0.37
XRN1-203ENST00000463916 E7EVH7 732 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 DUX1O43812 170 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 VIPP01282 170 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 FGF3P11487 239 aaPredicted RBP12.72□□□□□ -0.37
XRN1-203ENST00000463916 TYRP1P17643 537 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 VCLP18206 1134 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 ITGALP20701 1170 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 ABCG1P45844 678 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 LMAN1P49257 510 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 PPM1FP49593 454 aaPredicted RBP12.72□□□□□ -0.37
XRN1-203ENST00000463916 ZRANB3Q5FWF4 1079 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 SNAP47Q5SQN1 464 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 WDR74Q6RFH5 385 aaPredicted RBP12.72□□□□□ -0.37
XRN1-203ENST00000463916 LRRC69Q6ZNQ3 347 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 TMEM26Q6ZUK4 368 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 SERPINA9Q86WD7 417 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 SLC35F6Q8N357 371 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 CLDN19Q8N6F1 224 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
XRN1-203ENST00000463916 OR13J1Q8NGT2 312 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 COPS8Q99627 209 aa12.72□□□□□ -0.37
XRN1-203ENST00000463916 STN1Q9H668 368 aaKnown RBP12.72□□□□□ -0.37
XRN1-203ENST00000463916 CFAP20Q9Y6A4 193 aaKnown RBP12.72□□□□□ -0.37
XRN1-203ENST00000463916 IGLV3-16A0A075B6K0 115 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 CCDC162PA2VCL2 907 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 MGAT4DA6NG13 374 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 A8MU76 341 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 C9orf172C9J069 976 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 KCNJ13O60928 360 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 ACRV1P26436 265 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 MAPK10P53779 464 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 EPHA4P54764 986 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 GPR18Q14330 331 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 RPE65Q16518 533 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 GPR33Q49SQ1 333 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 BCL7AQ4VC05 210 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 TTC27Q6P3X3 843 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 PPP1R21Q6ZMI0 780 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 GSTA5Q7RTV2 222 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 JAMLQ86YT9 394 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 TRIM48Q8IWZ4 208 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 RASGEF1CQ8N431 466 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 GPR150Q8NGU9 434 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 OR2L2Q8NH16 312 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 COG1Q8WTW3 980 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 USP7Q93009 1102 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 TMEM159Q96B96 161 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 ULK4Q96C45 1275 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 ZNF514Q96K75 400 aaPredicted RBP12.71□□□□□ -0.37
XRN1-203ENST00000463916 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.71□□□□□ -0.37
XRN1-203ENST00000463916 UCK1Q9HA47 277 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 ZDHHC3Q9NYG2 299 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 FOXJ2Q9P0K8 574 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 PCDHGA7Q9Y5G6 932 aa12.71□□□□□ -0.37
XRN1-203ENST00000463916 AHCTF1Q8WYP5 2266 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 LILRA5A6NI73 299 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 USP27XA6NNY8 438 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 KLK10O43240 276 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 PRAMEF10O60809 474 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 ATP1B2P14415 290 aaPredicted RBP12.71□□□□□ -0.38
XRN1-203ENST00000463916 MSNP26038 577 aaKnown RBP12.71□□□□□ -0.38
XRN1-203ENST00000463916 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.38
XRN1-203ENST00000463916 TGIF1Q15583 401 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 TAS2R42Q7RTR8 314 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 ARHGAP22Q7Z5H3 698 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 MAIP1Q8WWC4 291 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 KCNE4Q8WWG9 221 aa12.71□□□□□ -0.38
XRN1-203ENST00000463916 JPH3Q8WXH2 748 aaPredicted RBP12.71□□□□□ -0.38
XRN1-203ENST00000463916 DCUN1D1Q96GG9 259 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms