RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 HPS6Q86YV9 775 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 MDGA1Q8NFP4 955 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 AGR3Q8TD06 166 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ANKRD49Q8WVL7 239 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 GAB3Q8WWW8 586 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 TBATAQ96M53 351 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CATSPER2Q96P56 530 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 TTC1Q99614 292 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SHCBP1LQ9BZQ2 653 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 TMEM245Q9H330 911 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 TFB2MQ9H5Q4 396 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CATSPERZQ9NTU4 200 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SPATS2LQ9NUQ6 558 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 NLE1Q9NVX2 485 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CACNA2D2Q9NY47 1150 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 MARCH4Q9P2E8 410 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 INTS6Q9UL03 887 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PSMD13Q9UNM6 376 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 TBC1D30Q9Y2I9 924 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SDK1Q7Z5N4 2213 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CCDC162PA2VCL2 907 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 H3BNX3 289 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 AIM2O14862 343 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PDE5AO76074 875 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 GOT2P00505 430 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ASLP04424 464 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 C7P10643 843 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PIM1P11309 404 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CD1DP15813 335 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF37AP17032 561 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ETFBP38117 255 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 WASP42768 502 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ACADVLP49748 655 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CLCN2P51788 898 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF140P52738 457 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 HERVK_113P63132 956 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 TIAL1Q01085 375 aaKnown RBP eCLIP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF177Q13360 481 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SIM2Q14190 667 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 TAF1AQ15573 450 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PDCD2Q16342 344 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PTPRNQ16849 979 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 FUT11Q495W5 492 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 USP39Q53GS9 565 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF678Q5SXM1 525 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 CAPRIN2Q6IMN6 1127 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 IZUMO2Q6UXV1 221 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 HACD2Q6Y1H2 254 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 RNF111Q6ZNA4 994 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 PDSS2Q86YH6 399 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 OR4L1Q8NH43 312 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SLC26A7Q8TE54 656 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SORCS1Q8WY21 1168 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 MOCOSQ96EN8 888 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ZC3H10Q96K80 434 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 DNAJC1Q96KC8 554 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 AARSD1Q9BTE6 412 aaKnown RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 ERVK-6Q9BXR3 956 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SYTL2Q9HCH5 934 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 UBA2Q9UBT2 640 aaPredicted RBP9.8□□□□□ -0.84
PTPRD-207ENST00000463477 VPS9D1Q9Y2B5 631 aa9.8□□□□□ -0.84
PTPRD-207ENST00000463477 SCN8AQ9UQD0 1980 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 GVINP1Q7Z2Y8 2422 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 TCRBV21S2A2A0A5A6 115 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 NEMP2A6NFY4 417 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 INSIG1O15503 277 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 GFRA3O60609 400 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 ZMPSTE24O75844 475 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 BAG2O95816 211 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 CAPNS1P04632 268 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 ME2P23368 584 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
PTPRD-207ENST00000463477 PLEKHG6Q3KR16 790 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 PITRM1Q5JRX3 1037 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 TMEM198Q66K66 360 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 NXNQ6DKJ4 435 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 CXorf57Q6NSI4 855 aaKnown RBP9.79□□□□□ -0.84
PTPRD-207ENST00000463477 KIAA1211LQ6NV74 962 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF549Q6P9A3 640 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 AFTPHQ6ULP2 937 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 METTL3Q86U44 580 aaKnown RBP9.79□□□□□ -0.84
PTPRD-207ENST00000463477 CIR1Q86X95 450 aaPredicted RBP9.79□□□□□ -0.84
PTPRD-207ENST00000463477 CLYBLQ8N0X4 340 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 SPATA6LQ8N4H0 392 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 CATSPER1Q8NEC5 780 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 PYDC1Q8WXC3 89 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 RCN3Q96D15 328 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 SGF29Q96ES7 293 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 ALG14Q96F25 216 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 CDKN2AIPNLQ96HQ2 116 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 BTBD9Q96Q07 612 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 C19orf43Q9BQ61 176 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 FEM1AQ9BSK4 669 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 KLHL4Q9C0H6 718 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 DERL2Q9GZP9 239 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 WDR41Q9HAD4 459 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 SCOCQ9UIL1 159 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 TMCO1Q9UM00 188 aa9.79□□□□□ -0.84
PTPRD-207ENST00000463477 TRAF6Q9Y4K3 522 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms