RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 POT1Q9NUX5 634 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 SEMA5BQ9P283 1151 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 OTOGQ6ZRI0 2925 aa15.37■□□□□ 0.05
SND1-203ENST00000463020 CACNA1DQ01668 2161 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 RGSL1A5PLK6 1076 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 C21orf140B9A014 251 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 KMOO15229 486 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 ZSCAN12O43309 604 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 KRT86O43790 486 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 MYBL1P10243 752 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 TBX2Q13207 712 aaPredicted RBP15.36■□□□□ 0.05
SND1-203ENST00000463020 NOMO1Q15155 1222 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 GPR19Q15760 415 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 IFI16Q16666 785 aaKnown RBP15.36■□□□□ 0.05
SND1-203ENST00000463020 PAPD7Q5XG87 772 aaKnown RBP15.36■□□□□ 0.05
SND1-203ENST00000463020 TMC3Q7Z5M5 1100 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 LRRC49Q8IUZ0 686 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 TRAM1L1Q8N609 369 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 CCHCR1Q8TD31 782 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 ADAMTS17Q8TE56 1095 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 FATE1Q969F0 183 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 NUDT9Q9BW91 350 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 ING2Q9H160 280 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 ZFYVE1Q9HBF4 777 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 EPHA6Q9UF33 1036 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 ZNF711Q9Y462 761 aa15.36■□□□□ 0.05
SND1-203ENST00000463020 ANKRD17O75179 2603 aaKnown RBP15.36■□□□□ 0.05
SND1-203ENST00000463020 ESPL1Q14674 2120 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 RECKO95980 971 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 CES1P23141 567 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 DCTP40126 519 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 SSR1P43307 286 aaKnown RBP15.35■□□□□ 0.05
SND1-203ENST00000463020 DCDC1P59894 354 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 ATP13A5Q4VNC0 1218 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 CCDC122Q5T0U0 273 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 AGAP9Q5VTM2 703 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 TIGD7Q6NT04 549 aaPredicted RBP15.35■□□□□ 0.05
SND1-203ENST00000463020 JMJD6Q6NYC1 403 aaPredicted RBP15.35■□□□□ 0.05
SND1-203ENST00000463020 DUS1LQ6P1R4 473 aaKnown RBP15.35■□□□□ 0.05
SND1-203ENST00000463020 RBMXL3Q8N7X1 1067 aaKnown RBP15.35■□□□□ 0.05
SND1-203ENST00000463020 AVL9Q8NBF6 648 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 SIDT2Q8NBJ9 832 aaKnown RBP15.35■□□□□ 0.05
SND1-203ENST00000463020 FAF2Q96CS3 445 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 CXorf40BQ96DE9 158 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 ZDHHC12Q96GR4 267 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 NRTNQ99748 197 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 ZSCAN5AQ9BUG6 496 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 BPIFA1Q9NP55 256 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 ERRFI1Q9UJM3 462 aaPredicted RBP15.35■□□□□ 0.05
SND1-203ENST00000463020 RARRES3Q9UL19 164 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 PSMD13Q9UNM6 376 aa15.35■□□□□ 0.05
SND1-203ENST00000463020 PCDHGA9Q9Y5G4 932 aaKnown RBP15.35■□□□□ 0.05
SND1-203ENST00000463020 GOLGA6L9A6NEM1 432 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 AKR1B15C9JRZ8 316 aaPredicted RBP15.34■□□□□ 0.05
SND1-203ENST00000463020 CEACAM4O75871 244 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 CDK14O94921 469 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 CYP1A2P05177 515 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 ARCN1P48444 511 aaKnown RBP15.34■□□□□ 0.05
SND1-203ENST00000463020 CTSCP53634 463 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 ITGA1P56199 1179 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 RAPSNQ13702 412 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 PCSK7Q16549 785 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 WASH2PQ6VEQ5 465 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 ZNF517Q6ZMY9 492 aaPredicted RBP15.34■□□□□ 0.05
SND1-203ENST00000463020 MTERF4Q7Z6M4 381 aaKnown RBP15.34■□□□□ 0.05
SND1-203ENST00000463020 TTC30BQ8N4P2 665 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 FDCSPQ8NFU4 85 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 SPATA22Q8NHS9 363 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 KIF18AQ8NI77 898 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 TADA1Q96BN2 335 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 TRIM11Q96F44 468 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 ZNF514Q96K75 400 aaPredicted RBP15.34■□□□□ 0.05
SND1-203ENST00000463020 RAB33BQ9H082 229 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 CHST8Q9H2A9 424 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 PDE7BQ9NP56 450 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 WASH6PQ9NQA3 447 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 FGF21Q9NSA1 209 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 TRMT1Q9NXH9 659 aaKnown RBP15.34■□□□□ 0.05
SND1-203ENST00000463020 NFKBIL1Q9UBC1 381 aaPredicted RBP15.34■□□□□ 0.05
SND1-203ENST00000463020 IP6K2Q9UHH9 426 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 AMACRQ9UHK6 382 aa15.34■□□□□ 0.05
SND1-203ENST00000463020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.34■□□□□ 0.05
SND1-203ENST00000463020 CFAP20Q9Y6A4 193 aaKnown RBP15.34■□□□□ 0.05
SND1-203ENST00000463020 LCA5LO95447 670 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 MT-ND3P03897 115 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 IDSP22304 550 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 CA4P22748 312 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 FECHP22830 423 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 ABRQ12979 859 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 TRIM14Q14142 442 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 RPE65Q16518 533 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 SLC6A19Q695T7 634 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 SYVN1Q86TM6 617 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 TRAPPC5Q8IUR0 188 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 PLD5Q8N7P1 536 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 CCNYQ8ND76 341 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 PRR7Q8TB68 274 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 THAP4Q8WY91 577 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 RAPGEF5Q92565 580 aa15.33■□□□□ 0.04
SND1-203ENST00000463020 ZNF592Q92610 1267 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms