RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 ITIH4Q14624 930 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 CLCA4Q14CN2 919 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 PPP1R7Q15435 360 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 METRNLQ641Q3 311 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 AFTPHQ6ULP2 937 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 B3GNT8Q7Z7M8 397 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 SLC9B2Q86UD5 537 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 ZNF761Q86XN6 746 aaPredicted RBP15.56■□□□□ 0.08
ERCC3-206ENST00000462306 CLDN19Q8N6F1 224 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 NAT8LQ8N9F0 302 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 OR2L2Q8NH16 312 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 OR4L1Q8NH43 312 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 GRAMD1AQ96CP6 724 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 ATXN7L3BQ96GX2 97 aa15.56■□□□□ 0.08
ERCC3-206ENST00000462306 MRM3Q9HC36 420 aaKnown RBP15.56■□□□□ 0.08
ERCC3-206ENST00000462306 MAP1BP46821 2468 aaKnown RBP15.56■□□□□ 0.08
ERCC3-206ENST00000462306 A0A1W2PNU3 283 aaPredicted RBP15.55■□□□□ 0.08
ERCC3-206ENST00000462306 KLHL33A6NCF5 533 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 OR52A4PA6NMU1 304 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 IVDP26440 423 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 PAFAH1B1P43034 410 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 PRAMEP78395 509 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 ZFP36L1Q07352 338 aaKnown RBP15.55■□□□□ 0.08
ERCC3-206ENST00000462306 CYP4F3Q08477 520 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 SEMA3AQ14563 771 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 AMZ1Q400G9 498 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 ZNF658BQ4V348 819 aaPredicted RBP15.55■□□□□ 0.08
ERCC3-206ENST00000462306 RNASEH2BQ5TBB1 312 aaKnown RBP15.55■□□□□ 0.08
ERCC3-206ENST00000462306 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 PACS1Q6VY07 963 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 SYT10Q6XYQ8 523 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 KLHL7Q8IXQ5 586 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 MPP5Q8N3R9 675 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 AVL9Q8NBF6 648 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 OR6P1Q8NGX9 317 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 MDM1Q8TC05 714 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 SH3KBP1Q96B97 665 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 SERPINB12Q96P63 405 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 SLC38A3Q99624 504 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 RDH14Q9HBH5 336 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 XAB2Q9HCS7 855 aaKnown RBP15.55■□□□□ 0.08
ERCC3-206ENST00000462306 KCNK4Q9NYG8 393 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 DKK4Q9UBT3 224 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 SOX13Q9UN79 622 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 PRSS21Q9Y6M0 314 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 UNC13CQ8NB66 2214 aa15.55■□□□□ 0.08
ERCC3-206ENST00000462306 C17orf113A0A1B0GUU1 675 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 GOLGA8MH3BSY2 632 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CCDC188H7C350 402 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 ZW10O43264 779 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 AP2A2O94973 939 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CPNE6O95741 557 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 ARNTP27540 789 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CASQ1P31415 396 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CCKBRP32239 447 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 NSG1P42857 185 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 MAGEA3P43357 314 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 INHBCP55103 352 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CFHR1Q03591 330 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CLPPQ16740 277 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-206ENST00000462306 LYPLAL1Q5VWZ2 237 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 NKAIN2Q5VXU1 208 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CES3Q6UWW8 571 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CERS6Q6ZMG9 384 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 ZNF574Q6ZN55 896 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-206ENST00000462306 USP53Q70EK8 1073 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 SLITRK4Q8IW52 837 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 PPIL6Q8IXY8 311 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 LILRA3Q8N6C8 439 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-206ENST00000462306 ZCCHC14Q8WYQ9 949 aaKnown RBP15.54■□□□□ 0.08
ERCC3-206ENST00000462306 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.54■□□□□ 0.08
ERCC3-206ENST00000462306 NXPE2Q96DL1 559 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 MFSD3Q96ES6 412 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 NUDT22Q9BRQ3 303 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 FOXP3Q9BZS1 431 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 STN1Q9H668 368 aaKnown RBP15.54■□□□□ 0.08
ERCC3-206ENST00000462306 CCDC86Q9H6F5 360 aaKnown RBP15.54■□□□□ 0.08
ERCC3-206ENST00000462306 UCK1Q9HA47 277 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 SLC40A1Q9NP59 571 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 MARCH4Q9P2E8 410 aaPredicted RBP15.54■□□□□ 0.08
ERCC3-206ENST00000462306 ASIC3Q9UHC3 531 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 PSMD13Q9UNM6 376 aa15.54■□□□□ 0.08
ERCC3-206ENST00000462306 PRAMEF33A0A0G2JMD5 474 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 LILRA5A6NI73 299 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 TAF4O00268 1085 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 DNALI1O14645 258 aaPredicted RBP15.53■□□□□ 0.08
ERCC3-206ENST00000462306 OR1I1O60431 355 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 VIPP01282 170 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 HOXB3P14651 431 aaPredicted RBP15.53■□□□□ 0.08
ERCC3-206ENST00000462306 CSF2RBP32927 897 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 EPHA4P54764 986 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 GPLD1P80108 840 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 DR1Q01658 176 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 RPE65Q16518 533 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 FASTKD1Q53R41 847 aaKnown RBP15.53■□□□□ 0.08
ERCC3-206ENST00000462306 TMEM26Q6ZUK4 368 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 SYDE1Q6ZW31 735 aaPredicted RBP15.53■□□□□ 0.08
ERCC3-206ENST00000462306 PIM3Q86V86 326 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 JAMLQ86YT9 394 aa15.53■□□□□ 0.08
ERCC3-206ENST00000462306 AGGF1Q8N302 714 aaeCLIP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms