RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 TRIM56Q9BRZ2 755 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FAM167BQ9BTA0 163 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 OSGEPL1Q9H4B0 414 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FAM114A2Q9NRY5 505 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 C20orf96Q9NUD7 363 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 SIRPGQ9P1W8 387 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 MARCH4Q9P2E8 410 aaPredicted RBP11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 GULP1Q9UBP9 304 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 SLC23A2Q9UGH3 650 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ZC3H7BQ9UGR2 993 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CHMP2BQ9UQN3 213 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 VPS9D1Q9Y2B5 631 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 U3KQA8 63 aa11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CNOT1A5YKK6 2376 aaKnown RBP11.47□□□□□ -0.57
TRAF3IP1-204ENST00000462122 KIR2DS5A0A0G2JLQ3 304 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 A0A0G2JNG1 304 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ESYT3A0FGR9 886 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 A6NCN8 305 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 GOLGA8KD6RF30 607 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 GOLGA8TH3BQL2 631 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 KIR2DS3K7RE56 304 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PRMT5O14744 637 aaPredicted RBP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 NOBOXO60393 691 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 NDUFS3O75489 264 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 BANF1O75531 89 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 RFPL3O75679 317 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DKK1O94907 266 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TRIM16O95361 564 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FTH1P02794 183 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FTH1P19P0C7X4 201 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 F3P13726 295 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 RPS3P23396 243 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DNAJC3Q13217 504 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FRG1Q14331 258 aaKnown RBP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 HLTFQ14527 1009 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 SEMA3AQ14563 771 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 KIR2DS5Q14953 304 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 AGAP9Q5VTM2 703 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 STEAP4Q687X5 459 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ZDHHC24Q6UX98 284 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 WASH2PQ6VEQ5 465 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 MICALCLQ6ZW33 695 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 KCNMB4Q86W47 210 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 C17orf82Q86X59 251 aaPredicted RBP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CILP2Q8IUL8 1156 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 IGDCC3Q8IVU1 814 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ZBED8Q8IZ13 594 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 SFRP1Q8N474 314 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CLDN19Q8N6F1 224 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 BEND7Q8N7W2 519 aaPredicted RBP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 FBXO36Q8NEA4 188 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 OR2L2Q8NH16 312 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 HM13Q8TCT9 377 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 CCDC97Q96F63 343 aaPredicted RBP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PWWP2AQ96N64 755 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TSSK1BQ9BXA7 367 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 STN1Q9H668 368 aaKnown RBP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 EPB41L5Q9HCM4 733 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 WASH6PQ9NQA3 447 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 INTS10Q9NVR2 710 aaKnown RBP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TOR4AQ9NXH8 423 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TBC1D29Q9UFV1 150 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 ACSL5Q9ULC5 683 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PADI4Q9UM07 663 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 DNAJC16Q9Y2G8 782 aa11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 TDRD6O60522 2096 aaKnown RBP11.46□□□□□ -0.57
TRAF3IP1-204ENST00000462122 PLXNB3Q9ULL4 1909 aa11.46□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ARID1BQ8NFD5 2236 aaPredicted RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 SPEGQ15772 3267 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 PDZK1P1A8MUH7 402 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 BHMG1C9JSJ3 638 aaPredicted RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 H3BMM5 538 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ZW10O43264 779 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 NUDT21O43809 227 aaKnown RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 OR1I1O60431 355 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 SNX2O60749 519 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 PNLIPP16233 465 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 GLB1P16278 677 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 PBLDP30039 288 aaPredicted RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 DEKP35659 375 aaKnown RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 HALP42357 657 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ADARP55265 1226 aaKnown RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 E2F1Q01094 437 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 PLOD1Q02809 727 aaPredicted RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 BIRC2Q13490 618 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 METRNLQ641Q3 311 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ZNF470Q6ECI4 717 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 GUSBP11Q6P575 273 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ZNF449Q6P9G9 518 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 IYDQ6PHW0 289 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ABRAXAS1Q6UWZ7 409 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 UNC5AQ6ZN44 842 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 CEP128Q6ZU80 1094 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 EFL1Q7Z2Z2 1120 aaKnown RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 LDB1Q86U70 411 aaPredicted RBP11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 SLC9B2Q86UD5 537 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 NAGSQ8N159 534 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 ARL14Q8N4G2 192 aa11.45□□□□□ -0.58
TRAF3IP1-204ENST00000462122 IFI44Q8TCB0 444 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms