RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ARHGEF7Q14155 803 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 SIM2Q14190 667 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 DRAP1Q14919 205 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 MAPKAPK3Q16644 382 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 GOLGA7BQ2TAP0 167 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 MGAT5BQ3V5L5 792 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 BOLA3Q53S33 107 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 PPM1LQ5SGD2 360 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 TANGO2Q6ICL3 276 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM171BQ6P995 826 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 OLFML1Q6UWY5 402 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 KIAA0408Q6ZU52 694 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 PPP1R32Q7Z5V6 425 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 TMEM110Q86TL2 294 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC47A2Q86VL8 602 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 TTC30AQ86WT1 665 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 SPATA2LQ8IUW3 424 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 THEM5Q8N1Q8 247 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 TMEM86AQ8N2M4 240 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 TTC39CQ8N584 583 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 SPC24Q8NBT2 197 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 NAXEQ8NCW5 288 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 SCAMP5Q8TAC9 235 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF461Q8TAF7 563 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 OLIG1Q8TAK6 271 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 MYCBPAPQ8TBZ2 947 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 STT3BQ8TCJ2 826 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 ACMSDQ8TDX5 336 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 SMG7Q92540 1137 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 TAF4BQ92750 862 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 USP13Q92995 863 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF653Q96CK0 615 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 EID2BQ96D98 161 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 PABPC5Q96DU9 382 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 RPGRIP1Q96KN7 1286 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 TRAPPC9Q96Q05 1148 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 MYADMQ96S97 322 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CGREF1Q99674 301 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 ACBD6Q9BR61 282 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 RPP25Q9BUL9 199 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CNPPD1Q9BV87 410 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CPEB1Q9BZB8 566 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 POMKQ9H5K3 350 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 MRPS18AQ9NVS2 196 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 RABL2AQ9UBK7 228 aaPredicted RBP4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CTNNAL1Q9UBT7 734 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 PCSK1NQ9UHG2 260 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CYTH4Q9UIA0 394 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 RAB21Q9UL25 225 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CAPN11Q9UMQ6 739 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CLCA2Q9UQC9 943 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 N6AMT1Q9Y5N5 214 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 INSL5Q9Y5Q6 135 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 CAPN7Q9Y6W3 813 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 F5P12259 2224 aa4.88□□□□□ -1.63
ATPAF1-203ENST00000460928 MYOFQ9NZM1 2061 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 FRYLO94915 3013 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 GAGE12BA1L429 117 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 GAGE12HA6NDE8 117 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TMEM200CA6NKL6 621 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TRIM64CA6NLI5 447 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC38A8A6NNN8 435 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PRR5-ARHGAP8B1AHC4 643 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 O00370 1275 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MDM4O15151 490 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MBTPS2O43462 519 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 VPS4BO75351 444 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 NUDT3O95989 172 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PLEKP08567 350 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 RPSAP08865 295 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 UCHL3P15374 230 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 HMGA1P17096 107 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TPH1P17752 444 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CCNCP24863 283 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PBX1P40424 430 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 VIPR2P41587 438 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 LHX1P48742 406 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 UBASH3AP57075 661 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TUBA1BP68363 451 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MRPS25P82663 173 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TSPY1Q01534 308 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 SULT2A1Q06520 285 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 ENPEPQ07075 957 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 ACTN3Q08043 901 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 BYSLQ13895 437 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TEAD2Q15562 447 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CSRP2Q16527 193 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 INSCQ1MX18 579 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PLA1AQ53H76 456 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 SPDYCQ5MJ68 293 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 TMTC4Q5T4D3 741 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 INTS11Q5TA45 600 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 LIN9Q5TKA1 542 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 HECTD2Q5U5R9 776 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 RAP1GAP2Q684P5 730 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 PLAG1Q6DJT9 500 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 THOC7Q6I9Y2 204 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CRTC1Q6UUV9 634 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 CLEC20AQ6ZU45 233 aa4.87□□□□□ -1.63
ATPAF1-203ENST00000460928 MED25Q71SY5 747 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms